Pseudomonas putida S610, EDP1_1172 (msbA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S610
GCF_000497385.1|latest
Locus Tag
EDP1_1172
NCBI Locus TagEDP1_RS03305
Name
msbA
Replicon EDP1.NODE_1604
Genomic location 75807 - 77576 (- strand)

Cross-References

RefSeq WP_023533052.1
GI 558877481
NCBI Locus Tag EDP1_RS03305
NCBI Old Locus Tag EDP1_1172

Product

Feature Type CDS
Coding Frame 1
Product Name
lipid A export permease/ATP-binding protein MsbA
Synonyms
Evidence for Translation
Charge (pH 7) 6.14
Kyte-Doolittle Hydrophobicity Value 0.178
Molecular Weight (kDa) 64.9
Isoelectric Point (pI) 9.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004607 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: EDP1_1172
Search term: msbA

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 4.3e-79
Percent Identity: 34.8
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 4.3e-79
Percent Identity: 34.8
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 4.3e-79
Percent Identity: 34.8

References

No references are associated with this feature.