Pseudomonas stutzeri NF13, B381_21756 (rplF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri NF13 contig00115, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCGGCTCGCCTGAGCCTTGCATTTTTGCAGGGTTTGCCCGTTGGCGACACGAGCCGTCCAAGGCTTATTTTTTTGTATTAGGAGCTAAGAGCCCATGAG TATGCAGGACCCGTTAGCGGACATGCTAACTCGTATCCGTAATGCCCAGATGGCCGAAAAGTCCGTCGTAAGCATGCCGTCTTCCACTCTGAAGGTGGCT GTTGCCAACGTTCTTCAAGGTGAAGGCTATATCGCGGGATACCAGGTCAGTGGCGACGCCAAGCCGCAACTGTCCATCGAGCTGAAGTATTTCGAAGGCC GTCCGGTCATCGAGGAGCTCAAGCGCGTAAGTCGTCCTGGCCTGCGCCAGTACAAATCCGTTGACCAGTTGCCGAAAGTACGTGGCGGCTTGGGTGTGTC GATCGTCTCCACCAACAAGGGTGTGATGACTGATCGGGCTGCTCGGGCTGCTGGTGTTGGCGGCGAAGTGCTTTGCACTGTGTTCTAAGGGGGGATAAGC
DNA Sequence for Gene
>B381_21756 |rplF
ATGTCTCGCGTTGCTAAGAACCCCGTCAAGCTGCCCGCTGGCGTCGAAATCAAGATGTCCGGTCAACAGCTTTCGGTGAAGGGTGCCAAAGGCGCTCTCG AACTGAATGTTCATCCCTCCGTGGAAATCATCCAGGAGTCTGGTGAGCTGCGGTTTGCTGGCCGTAATGGCGACCAGCAGACTCGCGCCATGGCCGGTAC TACCCGCGCCCTGGTCAATAACATGGTGATCGGTGTCAGCCAGGGCTTCGAGCGCAAGCTCCAGCTGGTTGGTGTTGGTTACAAGGCGCAAGCCAAAGGT CAAGTGCTGTCCCTGGCTCTCGGTTTCTCGCATCCGGTGGATTACGAACTGCCGCAAGGCGTTACCGCTGAGACCCCCAGCCAGACCGATATCCTGATCA AGGGTGTCGACAAGCAACTGGTCGGTCAGGTGGCTGCTGAAATCCGTGACTTCCGTCGCCCTGAGCCTTACAAGGGCAAAGGTGTGCGGTACTCGGATGA AGTAGTCCGTCGCAAAGAAGCTAAGAAGAAGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCATAGCAAATGAGCGTAAAGAAAGAAACTCGTCTGCGTCGCGCTCGCAAGGCACGCCTGAAGATGCGCGAGCTGGAAACCGTACGCCTCTGCGTGTAC CGCTCTTCCCAGCACATCTACGCCCAGGTCCTTTCGGCCGACGGCGGCAAGGTCCTGGCCAGCGCCTCGACTCTGGACAAAGAACTGCGTGACGCCGCCA CCGGCAACGTTGACGCTGCCAAGAAAGTCGGTCAGCTGGTCGCTGAGCGCGCGAAAGCCGCAGGTGTCACTCAGGTGGCGTTCGACCGTTCTGGCTTCAA GTACCACGGTCGTGTGAAGGCACTGGCTGAAGCTGCTCGTGAAGGCGGGCTGGAGTTCTAAGTTATGGCAAATAACGAGCAAAAGCGCGACGAAGGCTAC ATCGAGAAGCTGGTTCAAGTTAACCGCGTCGCAAAAACTGTAAAAGGTGGTCGTATCTTCACCTTCACCGCGCTGACTGTGGTCGGTGACGGCAAGGGTC
Amino Acid Sequence
>50S ribosomal protein L6
MSRVAKNPVKLPAGVEIKMSGQQLSVKGAKGALELNVHPSVEIIQESGELRFAGRNGDQQTRAMAGTTRALVNNMVIGVSQGFERKLQLVGVGYKAQAKG QVLSLALGFSHPVDYELPQGVTAETPSQTDILIKGVDKQLVGQVAAEIRDFRRPEPYKGKGVRYSDEVVRRKEAKKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site