Pseudomonas stutzeri NF13, B381_20156

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri NF13 contig00102, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCGCTTCGTGCACTTCTGGGACCCGGGATGCCCGTGCAACGTCGGCAATCAGCAGCACCTGGAAGAATTGCTCAAGCACTTTGCCGGACAACCGGTGGT CTTCTACGAAGTACGCAGGCCGGGCAGCAAGGGCCGCTTGCCACAGCCGCTGGCGTCGCTCAAATCCCTCGGCTCCCTGCCCGGCTCCGATCTATTGCCC GCCAGCCCCGCCGTCGGCATCTGGGATCAACATGGCGAGCTGGTCTATATAGGGCCTTACAGCGAGGGCGCGGTATGCAGCTCGGACAACAGCTTCGTCG AGCCGATCCTCGAGGCGGTGCTGGCCGGGCGCAAGGTACGCGCCACCCACTCGCTGGCGGTGGCCTGCTTCTGCGAGTGGCAGCGGTAAGGCGGCGAGCG GCAAACTTGATTCCGATCAAATGATAATTATTATCAACTAAACCAGAATCGCTCCCATCCAGTCGCTATCGCAGCCGACGAACCATCCGGGAGCCGTTCG
DNA Sequence for Gene
>B381_20156
ATGATCCTCCGTCTTCACCCACTCGCCCTGGCCTGCCTGGCCGCCAGCACCTCCGCACTCGCCGCTCCGCTGGAGCTGCAGGAAACCGTCGTCACCGCCA AGGGCTACGAGGCCGCGACACAGGACATTCCGCAAGCCATCGAGGTGCTGCAGGCACAGCCAGCCGAAACGGCAGCGCCGGCCGGTAGCCTGTTCCGCGG CAAGCCGGGCCTGGCCGTGCACAGCGACGGCGCCTGGGGACAGAACCCGGTGTTGCGCGGCATGAAGAAGGAAAGCGTGGTGCTGATGGTCGACGGCGTG CGGGTCAACTCCGGCCAGCCGCAGGGCTCGCTGGCATCCATGCTCGATCTCGGCCTGCTGGAGCGTGCCGAAGTGGTCAAGGGACCGGGCTCGGTGCTGT ACGGCAGCGGCGCCATGGGCGGGGTGGTCAACCTGATCACGCCACAGGCACGCTTCACCGAGCAGAACGAACGCAGCGGACGTTTCTCCACCAGCGCCAG CAGCATCGACAAGGGCTTCGCCGGCGCTACGCTGCTGCGCGACTCCAGCAGCGATCATGCGCTGGTGCTGGGCGTTGCCGGGCGCAAGGTCAACGACTAC AAGAGCCCCAGCGGCACCGAAGAAAACACCGGTTACAGCTCCGATACGCTGTTGCTCAAGTACAAGCAGCGCCTGGCCGAGGATGTCAGCGTCAACCTGA ACGTCCAGCGCCACACCGACCGCGACGTCTGGTACCCGGGCTCGGCGCGCACCGGCGGCCAGCCGGGCGGCGCCGGCATCCCGGTACCACTCGGTACCGC GACCATCCATTCGCCGCAACAGCAGCGCGAGCTGTTCCAGATCGGTCTGGAAAACGGCCTCGGTGAAGGCACCCTGACCACCGAACTCTATCGTCAGGAG GTCTACCGGGAGATCCGTGCCTACTCCGAACGGCTCGACCGCGACTACGTTCGCAACGACGTCAGCTTCATCACTCATGGGCTGCGCTCGAGCTGGGTGG TGCCGGTCGCCGATCACCTGCTGACGGTGGGCGTCGACGGCTGGAAGATGACCGGCGATCCGGAGCGCTACGTGGATGGCCCACCGACCTTCAACAACAA CCAGCGCAACGACCCCTTCAAGGATGCCGAGATCGAATCCTACGGGCTGTTCGTGCATGACGAATTCGACCTCGGCCAGACACGGTTCACCGCCGGCGCC CGCTACGATCGCATCAGCGCCGATGCCCGCGCCAAGGGCAACGGCCCGTCATTGAGAACCAGCGGCCTGGACAGCAGCGACCATAACCTGTCGTGGTCGC TGGGCGCGCTGCACCCGCTGACAGACACCCTCAATCTCTACGCCAACATCGGCCAGGCCTACCGCGCCGCCGACATGCGCGAGCGCTACGACGATGCGCC GCGCGGCGACGGCTACTTCCATGTCGGCAATCCGCAGCTGGACCCGGAGCGCTCCACCAGTTTCGAGTTCGGCCTCAAGGGTAGCGATGGCGATTTCACC TATCAGCTGGCAGCCTTCCACACCCGCATCGACGATTACATCGCCGGCCGGGTGACCGGCACCAACGCGCCCAACGGGCTGCCGATCAAGCGCACCGAGA ACCTCGACAAAGTGGTGATCTACGGCCTCGAAGGCAGTGCCAGCAAGGGTGTCGGCGCCTTCGTGGTGGACGGCAGCTTCACCTGGCTGCGCGGCGAGAA CGAACAGGACGACGAACCACTGCACCAGATGCCAGCCCACGAGCTGACCCTGGGCATCGGCCAGCCAGCCGAGCGCGGTCTCTACTGGCATGCCCAGCTG CGTGCGGTCGCCGAGCAGGATCGTGTAGCGATCGAGTTCACCCGCGGCGGTGAGGACCGTACCGCAGGCTTCGTTACCGCCGATGCCAGTCTCGGCTGGG GCTTCGGCAAGATCGGCGTGCTGCAGACCGCCAACCTCGATGTGCGCCTGAGCAACCTGTTCGACAAGGCCTACCACGAGCATCTGGCCGATGGCATCAG CGGCGACGAGCTGGAAGCACCCGGGCGCGGCATTACCGTCGCGCTGAGCGGGAGCTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCTCCGCCGTCTGCTGTTGGTCGTCCTGCTGGTGGCCGGGGCACCAGCGCTGGCGGACAAACTGCCGCGCCTGGTCCTGGCCGGCCCTTCTTCGTCGGT ATCGAATCCGCTGATCCACATGGTCGAATCCGGCGCACTGGACGACCTGGCGGACAAGGTGGAATTCGTCAGCTGGCGCGATCCCGACCAGTTGCGCCTG CTGGCGCTGAACCAGCAGGCGGACGTGCTGGCCATGCCCGTCAACGTCGCGGCCAACCTCTACAACCGTGGCGCCAAGCTGCGCATGCTCAATGTCTCGA CCTGGGGGCTGCTCTGGCTGGTGTCCCGCGAACAGGGCCTGACCACCCTGGACGAGCTGCGCGGCAAGGAAATCGCCATGCCGTTCCGCGGCGACATGCC GGATATCCTCTTCGGCCTGCTGGCCGAGCGTGCCGGCATCGATGTGCGCAAGGACCTGCGTCTGCGCTACGTCGCCACCCCCATCGACGCCATGCAGCTG
Amino Acid Sequence
>TonB-dependent receptor
MILRLHPLALACLAASTSALAAPLELQETVVTAKGYEAATQDIPQAIEVLQAQPAETAAPAGSLFRGKPGLAVHSDGAWGQNPVLRGMKKESVVLMVDGV RVNSGQPQGSLASMLDLGLLERAEVVKGPGSVLYGSGAMGGVVNLITPQARFTEQNERSGRFSTSASSIDKGFAGATLLRDSSSDHALVLGVAGRKVNDY KSPSGTEENTGYSSDTLLLKYKQRLAEDVSVNLNVQRHTDRDVWYPGSARTGGQPGGAGIPVPLGTATIHSPQQQRELFQIGLENGLGEGTLTTELYRQE VYREIRAYSERLDRDYVRNDVSFITHGLRSSWVVPVADHLLTVGVDGWKMTGDPERYVDGPPTFNNNQRNDPFKDAEIESYGLFVHDEFDLGQTRFTAGA RYDRISADARAKGNGPSLRTSGLDSSDHNLSWSLGALHPLTDTLNLYANIGQAYRAADMRERYDDAPRGDGYFHVGNPQLDPERSTSFEFGLKGSDGDFT YQLAAFHTRIDDYIAGRVTGTNAPNGLPIKRTENLDKVVIYGLEGSASKGVGAFVVDGSFTWLRGENEQDDEPLHQMPAHELTLGIGQPAERGLYWHAQL RAVAEQDRVAIEFTRGGEDRTAGFVTADASLGWGFGKIGVLQTANLDVRLSNLFDKAYHEHLADGISGDELEAPGRGITVALSGSF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site