Pseudomonas stutzeri NF13, B381_20156
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF07715 | TonB-dependent Receptor Plug Domain | IPR012910 | TonB-dependent receptor, plug domain | 41 | 142 | 2.0E-17 |
| SUPERFAMILY | SSF56935 | Porins | - | - | 28 | 686 | 1.72E-95 |
| Gene3D | G3DSA:2.170.130.10 | - | IPR037066 | TonB-dependent receptor, plug domain superfamily | 22 | 148 | 2.7E-24 |
| CDD | cd01347 | ligand_gated_channel | - | - | 48 | 686 | 1.58318E-73 |
| Gene3D | G3DSA:2.40.170.20 | - | IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | 151 | 686 | 3.7E-80 |
| PANTHER | PTHR30069 | TONB-DEPENDENT OUTER MEMBRANE RECEPTOR | IPR039426 | TonB-dependent receptor-like | 5 | 683 | 3.3E-79 |
| Pfam | PF00593 | TonB dependent receptor | IPR000531 | TonB-dependent receptor-like, beta-barrel | 275 | 682 | 1.1E-45 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.