Pseudomonas sp. M47T1, PMM47T1_11117

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M47T1 contig08, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TACAACCCCGACCTGAAATTCGTGTTCATCTACGCCGTGCTGTTCCTGGTGGTGATTGGCGTGCTGTACATCAAGCACCGCCTCACCCGCATGCCAATCG GCCGCGCCTGGGAAGCCCTGCGCGAAGACGAAATCGCCTGCCGGGCCATGGGCCTGAACCATGTGTTGGTCAAGCTTTCGGCGTTCACCCTGGGCGCATC TACGGCCGGCCTGGCGGGGGTGTTCTTTGCCAGCTACCAAGGCTTCGTCAACCCTACCTCGTTCACCTTCTTCGAGTCGGCGCTGATCCTGGCCATCGTG GTGCTGGGTGGCATGGGCTCCACGGTGGGCGTGGTCATTGCCGCCTTCGTGCTGACCGTAGCCCCCGAGTTGCTGCGCTCGTTCGCCGAATACCGCGTGC TGCTGTTCGGCGTGCTGATGGTGCTGATGATGATCTGGAAACCACGCGGCCTGATTCGCATCAGCCGTACCGGTGTGGTCCCGCGTAAAGGAGTGGCGCC
DNA Sequence for Gene
>PMM47T1_11117
ATGAGTGAATACGTACTCACGGTCGAAAAACTGATGATGCACTTCGGTGGCATCAAGGCTCTCAGCGATGTCAGCCTGAAGGTCAAGCGCAATTCGATCT TCGCCCTGATCGGCCCCAACGGCGCCGGCAAGACCACGGTATTCAACTGCCTGACCGGCTTCTACAAGGCCACGGGTGGGCGCATCGAGTTGCAAACCCG CGGCATGAAAACCAACGTCATCAAGCTGCTGGGCGAACCCTTCCAGCCCACCGACTTCGTCTCGCCGCGCAGCTTCGCCAGCCGCCTGTATTACAAGATG TTCGGCGGCACCCACCTGGTCAACCGCGCAGGCCTGGCCCGTACCTTCCAGAACATTCGCCTGTTCAAGGAAATGTCGGTGGTGGAAAACCTGCTGGTGG CCCAGCACATGTGGGTGAACAGGAACATGGTCGCCGGCATTCTCAACACTCGCGGCTATCGCAAGGCTGAAGACGACGCCCTCAACACGGCGTTCTACTG GCTGGAGGTGGTGGACCTGGTGGACTGTGCCAACCGCCTGGCTGGTGAGCTGTCGTACGGCCAACAGCGCCGCCTGGAAATTGCCCGGGCCATGTGCACC CGCCCACAGGTGATCTGCCTGGACGAACCGGCGGCAGGCCTCAACCCACAGGAAACCGAAGCGCTGAGCGGCATGATCCGCCTGCTGCGCGACGAACACG ACATGACCATCGTGCTGATCGAACACGACATGGGCATGGTCATGGGCATTTCCGACCATATCGTGGTGCTGGACCACGGCAACGTGATTGCCGAGGGCGG CCCGGAACAGATCCGCAACGACCCGAAAGTGATTGCCGCCTACCTGGGCGCGGATGAAGAGGAACTGGTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTACCCCGATCCTCGAACTGAAAGAGCTCGACGTGTTTTACGGGCCCATCCAGGCCCTGAAAAAAGTGTCCATGCACATCAACGAAGGCGAGACGGTGAG CCTGATCGGCTCCAACGGCGCGGGCAAGTCGACGCTGCTGATGTCGATCTTCGGCCAGCCGCGCGCTGCGGGCGGGCAGATCATTTACCAGGGCACCGAC ATCACCAAGAAGTCTTCCCACTACATTGCCTCAAACGGCATAGCCCAGTCTCCGGAAGGGCGGCGGGTGTTCCCGGACATGTCGGTGGAAGAGAACCTGA TGATGGGCACCATCCCCATCGGCGACAAGTTTGCCGGTGAGGACATGCAGCGCATGTTCGAACTGTTCCCACGCCTCAAGGAACGCCGCAATCAGCGCGC CATGACCATGTCGGGGGGCGAGCAGCAGATGCTGGCCATCGCCCGCGCCCTGATGAGCCGGCCCAAGCTGTTGCTGCTCGACGAGCCGTCGCTGGGCCTG
Amino Acid Sequence
>amino acid ABC transporter ATP-binding protein
MSEYVLTVEKLMMHFGGIKALSDVSLKVKRNSIFALIGPNGAGKTTVFNCLTGFYKATGGRIELQTRGMKTNVIKLLGEPFQPTDFVSPRSFASRLYYKM FGGTHLVNRAGLARTFQNIRLFKEMSVVENLLVAQHMWVNRNMVAGILNTRGYRKAEDDALNTAFYWLEVVDLVDCANRLAGELSYGQQRRLEIARAMCT RPQVICLDEPAAGLNPQETEALSGMIRLLRDEHDMTIVLIEHDMGMVMGISDHIVVLDHGNVIAEGGPEQIRNDPKVIAAYLGADEEELV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site