Pseudomonas sp. M47T1, PMM47T1_11117

Gene Feature Overview

Strain	Pseudomonas sp. M47T1 GCF_000263855.1|latest
Locus Tag	PMM47T1_11117
Name
Replicon	contig08
Genomic location	57573 - 58445 (+ strand)

Cross-References

RefSeq	WP_008368602.1
GI	495644023
INSDC	EIK96473.1
NCBI Locus Tag	PMM47T1_11117
UniParc	UPI00026082D5
UniProtKB Acc	I4N4T3
UniProtKB ID	I4N4T3_9PSED
UniRef100	UniRef100_I4N4T3
UniRef50	UniRef50_G8Q4Y5
UniRef90	UniRef90_D7HTZ2

Product

Feature Type	CDS
Coding Frame	1
Product Name	amino acid ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-1.44
Kyte-Doolittle Hydrophobicity Value	-0.033
Molecular Weight (kDa)	32.3
Isoelectric Point (pI)	6.63

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004529 (504 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMM47T1_11117 Search term: amino acid ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000442634 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 9.1e-14 Percent Identity: 24.9
Ensembl 110, assembly GRCh38.p14	ENSP00000396789 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 9.1e-14 Percent Identity: 24.9
Ensembl 110, assembly GRCh38.p14	ENSP00000411096 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 9.1e-14 Percent Identity: 24.9

References