Pseudomonas alcaliphila 34, D567_RS0111205
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.1330.60 | - | IPR036737 | OmpA-like domain superfamily | 204 | 324 | 5.3E-41 |
| PRINTS | PR01021 | OMPA domain signature | IPR006664 | Outer membrane protein, bacterial | 219 | 241 | 8.5E-18 |
| PRINTS | PR01021 | OMPA domain signature | IPR006664 | Outer membrane protein, bacterial | 249 | 264 | 8.5E-18 |
| PANTHER | PTHR30329 | STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX | - | - | 213 | 317 | 4.8E-32 |
| Gene3D | G3DSA:2.40.160.20 | - | - | - | 15 | 180 | 2.0E-42 |
| Pfam | PF05736 | OprF membrane domain | IPR008722 | Outer membrane porin F, N-terminal | 1 | 183 | 1.3E-79 |
| PRINTS | PR01021 | OMPA domain signature | IPR006664 | Outer membrane protein, bacterial | 264 | 280 | 8.5E-18 |
| Pfam | PF00691 | OmpA family | IPR006665 | OmpA-like domain | 219 | 314 | 4.0E-24 |
| SUPERFAMILY | SSF103088 | OmpA-like | IPR036737 | OmpA-like domain superfamily | 197 | 319 | 1.44E-39 |
| SUPERFAMILY | SSF56925 | OMPA-like | IPR011250 | Outer membrane protein/outer membrane enzyme PagP, beta-barrel | 33 | 185 | 1.75E-14 |
| CDD | cd07185 | OmpA_C-like | IPR006665 | OmpA-like domain | 214 | 320 | 3.37429E-48 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.