Pseudomonas alcaliphila 34, D567_RS0109000

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas alcaliphila 34 ID, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGCACAGCAACGGTGTGCTCAGCCGTTTGCGTCCCTCTCTGCTGGAAGACCATCCGCTCCCCGGCCCGCCTGGGCGTGGTGCGATCTTCCTGCGTTTGG GCGAGGGTGAGCATGCACTGGGCGTGGTGATGATGCATCTGGCGCTGGGAGCTCGCACCCGGACGCGGCAACTGGCCTACATTCGTGAGCGTGTCAGCGA GTTTCGCCACCTGGTGCTGATGGGCGACATGAACACCCATGCTGTCGACCTGCTGGAGAGCTCCCCGTTGCGCGACCTCGGCCTGATCGCGCCGCAGGTC GAAGCGACCTTCCCCAGCTGGCGACCGCAGCGCTGCCTCGATCATATTCTGATCAGTTCCGAGCTCGAGCTGGGGCGCGTCGATGTACTCAGTCAGCCGA TTTCCGATCACCTTCCCGTGGCCGTGGAAATCCGCCTGCCGGAAGCACAGAATGCTGCGCAAATGCCTATGCTGAAGACGCCATCTCCCGAGTAAGCCGT
DNA Sequence for Gene
>D567_RS0109000
ATGAGCGATGACGCGCAACGCTGGAAAGAAAAGTACCTGAGCAGCCTGGAACAGCAGGAGAAGCTCGACCGCGGTTGGGAGTTGCGCCTGGATCTGCTGC GCCGGGGGCTGGTGCGCAGCAGCCTGGCCGCCGAGGGCGCGGACAAGGCGGTCGATCAATGCATGCAGGAAATGCGCGAAATTCTTCGCCGCGACGATAT GGACGCTGCATTGGGCGGCCTTATCCCGCGTCTGGAAAAGGCTGTGCTGGATTCCGAGCAGCGCCGTCAGCAGCGTGCCGCAGAGGCTGCGACTGCGTTG GCTGGCTTGATCGAGCAATTACAGCGTCTGCAACCGCCCCGCGAGGTGCGCAAGGCACTCAAATCACTGGGCAAGCAGTTGCAGGATGCCACCGCACACC AGTACCTGCTGCCGGCGCTGCTCAGCCAGCTGAGTAATCTGCAGGGCCAGGCGCTGACCGTTCTGCAGGCTCCGGCGCAGGAACAACCAGGCCTGCTTCA GCGCCTGTTCGGCTCGCGCAGCGAGACCAGCGAAAGCAATGAGGATGCGCCGGACCGTGTTGCTGAGGTCGCTAGCGTTATCGAGGAGCCCGCACCAGAG CCAGCGCCAACGCCAACGCCAGCATCCGCGCCTGCCACCGTCGCGGTAGCGAACGAGTCGCCTCCCCGTGTTGCCAGAGTGATTAGCGCGCCGGCCCAGC ATCAGGCCCACGAGGCTTCGCCCGTGCTCGATAGCCTGCCTCTGCCGCCGGGGCTGGTGCGGCAGGAGGGTGCCGACGACAGCCCGTTTTCATTGCCCAG CAGCGAACCTGGATACAGCGCGGTGGCGCCGCATATCGCCAGCAGTCTGCGTGGCCTGCTCGACGAGCTCGAGCTGCCGGCGCGCCATCTGCCGCAAGGT GACGCGCTGCGCCTGCGACTCGAGGGCAATCTCAACTGGTACGAGCTGGTGCCGGTGCTGGATGATCTGGCCGTGCTGGTGCTTGCCGTCACCGATAGCG GCCAGCGCGAGTTTGCCGGCTATCTCAAGCAACTCAACGAGCGCCTGGCTGCCTTCATCGAAACCCTCAGCGAGGCGCACGAGGGCTACAGCGCGTCAGT GGAGAATGCGCGCAGTTTCAACCAGCAACTGCGGGATCAGGTCAGCGATCTGCAGAACAGCGTGCAGGAAGCTGCCGATCTGGAATCGCTCAAGCAGGCT CTGGAACAGCGCCTGGAAGGGCTCTTGCAAAGTGTCAGCAGTCATCAGCGTCAGCGCGACAGCAGTGAAGACGACGTGGCCGAGCGGCTGCAGGGCCTGG TCAAGCGTGTCGCCGAGATGGAGCAGGAAGCGCAGCAATTTCGCGAGCATATCGAGGAGCAGCGACAGAAGTCCTTGCTGGACCCCCTGACTGGGTTGCC CAACCGTGCCGCCTGGAGCGAGCGTCTCGACCTGGAAGTTGCTCGTCGCCAACGCTATGGCGGCCAGCTGTTGTTGGCGGTGCTGGACGTCGATCACTTC AAGCGGATCAACGACGGCTACGGCCACCTGGCAGGTGATCGAGTGCTGAAGATCATCGCCGGGGAGCTCAGCAAGCGTTTGCGCAAGACCGACTTCATTG CCCGTTTTGGTGGCGAGGAGTTCGTTCTGCTGATTCCTGCAACGCCGCTGGAGGGAGGTGTCCAGCTTCTGGAAACCCTGCGCGCGGCAATCGAGGCCTG CCCGTTCCACTTCAAGGGTGAGCCGGTGACCATCACCTTCTCCGCCGGTATCGCCGAGTTTCGCAATGGCGAGGCGACCGAGGTCACCTTCGAACGTGCC GACCAGGCGCTATATCGCGCCAAGGGCGCGGGGCGTAACCGAGTCGAACAGGCTGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCCGTCTACGTCGAGCCGCAGCGGCAGGCGCCGCGGCTCCCGTACGAACCACTCACTCCTTCTAGGATGTTGCCTCGGCCGGGTCCCTGCTGGTTGCTC CAGCGGTTCGTGCCCGTGGCGCGTGATCGTCCTCCTCCTGCAGCGGCACCTCGTTGCCCTGAGCGTCGTACAGCTTGCCGCCGATGAAGTGGTCGCCATC GTGCAGGGCGGCGATGTCGCGGTAGCGCAGGCTGCGCTCGGTGCCTGCGACGAATACCGACTGCTGATCCGAGTTGCCGGCGGTGAAATGGTTGAACAGC AGGTTGAGCAGGATCGCCATGATCGCCGCCGAGCTGATGCCGGAGTGGAAAATGGTCTCGAACCAGGCCGGGAAGTGATGGTAGAAGCTGGGCATGGCGA TGGGGATCATGCCGAAGCCGATGGAAGTAGCGACGATCACCAGGTTCATGTTGTTGCGGTAGTCGACCTTGGCCAGGGTGCGGATGCCGCTGGCGGCAAC
Amino Acid Sequence
>diguanylate cyclase
MSDDAQRWKEKYLSSLEQQEKLDRGWELRLDLLRRGLVRSSLAAEGADKAVDQCMQEMREILRRDDMDAALGGLIPRLEKAVLDSEQRRQQRAAEAATAL AGLIEQLQRLQPPREVRKALKSLGKQLQDATAHQYLLPALLSQLSNLQGQALTVLQAPAQEQPGLLQRLFGSRSETSESNEDAPDRVAEVASVIEEPAPE PAPTPTPASAPATVAVANESPPRVARVISAPAQHQAHEASPVLDSLPLPPGLVRQEGADDSPFSLPSSEPGYSAVAPHIASSLRGLLDELELPARHLPQG DALRLRLEGNLNWYELVPVLDDLAVLVLAVTDSGQREFAGYLKQLNERLAAFIETLSEAHEGYSASVENARSFNQQLRDQVSDLQNSVQEAADLESLKQA LEQRLEGLLQSVSSHQRQRDSSEDDVAERLQGLVKRVAEMEQEAQQFREHIEEQRQKSLLDPLTGLPNRAAWSERLDLEVARRQRYGGQLLLAVLDVDHF KRINDGYGHLAGDRVLKIIAGELSKRLRKTDFIARFGGEEFVLLIPATPLEGGVQLLETLRAAIEACPFHFKGEPVTITFSAGIAEFRNGEATEVTFERA DQALYRAKGAGRNRVEQAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site