Pseudomonas syringae pv. syringae SM, PssSM_1079 (lptF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae SM
GCF_000412165.1|latest |
| Locus Tag |
PssSM_1079
|
| NCBI Locus Tag | PSSSM_RS20105 |
| Name |
lptF
|
| Replicon | chromosome |
| Genomic location | 1232099 - 1233226 (+ strand) |
Cross-References
| RefSeq | WP_003316899.1 |
| GI | 489410920 |
| NCBI Locus Tag | PSSSM_RS20105 |
| NCBI Old Locus Tag | PssSM_1079 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
permease
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 8.48 |
| Kyte-Doolittle Hydrophobicity Value | 0.299 |
| Molecular Weight (kDa) | 41.7 |
| Isoelectric Point (pI) | 9.89 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001837 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PssSM_1079
Search term: lptF
Search term: permease
|
Human Homologs
References
No references are associated with this feature.