Pseudomonas plecoglossicida NB2011, L321_04106
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.50.1980 | Nitrogenase molybdenum iron protein domain | - | - | 146 | 288 | 3.4E-36 |
| Gene3D | G3DSA:3.40.50.1980 | Nitrogenase molybdenum iron protein domain | - | - | 16 | 144 | 5.4E-29 |
| PANTHER | PTHR30535 | VITAMIN B12-BINDING PROTEIN | - | - | 26 | 286 | 1.5E-47 |
| Pfam | PF01497 | Periplasmic binding protein | IPR002491 | ABC transporter periplasmic binding domain | 30 | 261 | 1.2E-31 |
| Coils | Coil | Coil | - | - | 142 | 162 | - |
| SUPERFAMILY | SSF53807 | Helical backbone metal receptor | - | - | 26 | 285 | 6.28E-50 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.