Pseudomonas sp. GM25, PMI24_02192

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM25 PMI24_contig_60.60, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGTCGAGCGCTTGAAGGCGTTGGGCCTGAAAGTTGCCCTGGACACCAGCGGCGACGCCTTGCGCGCGGCGCTCAAGGCCGGCCCGTGGCTGATCAAGC CGAATACCGAAGAGCTGGCCGATGCGCTGGGCTGTGATGTGTTGTCCCACGCAGCTCAGGCTGAGGCGGCCAATCGGCTGCACGCTCAAGGCATCGAGCA CGTGGTGATCTCCCACGGCGCCGACGGTGTGAACTGGTTCAGCGTCGGCTCGGCGCTGCATGCGACGCCGCCGAAGGTCAGCGTCGCCAGCACGGTCGGT GCCGGCGATTCGTTGCTGGCCGGCATGCTGCACGGTCTGCTCAGCGCCGACACGCCGGAACAAACCCTGCGCACGGCCACCGCGATTGCGGCGCAGGCGG TGACCCAGATCGGTTTCGGTATTCACGATGCTGCGCAACTGACGCAGCTCGAACAGGGCGTGCGCGTGCGCCCCCTGACAGAACAATAAGAGGGTTTGTC
DNA Sequence for Gene
>PMI24_02192
ATGAAGTTAGCCATTGTCACGGCCTGCCCGAACGGCATGGTCACCAGTGTGCTGTGCGCCCGGCTGCTGGATGCCGCGGCCCAGCGTCAGGGCTGGAGCA CCAGCGTCGAAGTGGTGGATGCGGCGCATCCGGAACGCGAGTTGTCGGCGGCCACGATCGAGGCCGCCGAGTGGGTATTGCTGGTGGCCACGGGACCTGT GGACATGACCCGGTTCATCGGCAAGAAAGTCTTTCGGATCGCGCCGGCGCAAGCCCTTCAGGATGTCGAAGAAGTACTGCGGCGTGGCGCCGTCGAGGCG GAAGTTTACGTCGCTGACGAAACGCCGCCCGTGGTTGCCAGCGCACAAGCGCCGCGTCTGGTTGCCGTCACCGCATGTCCGACCGGCGTCGCCCACACCT TCATGGCCGCCGAAGCCTTGCAGCAAGCCGCCAAGCGTCTGGGCTATGACCTGCAAGTCGAAACCCAGGGCTCGGTCGGCGCGCGAAATCCGCTGAGTGC GGCAGCCATCGCCGAAGCTGACGTGGTGCTGCTGGCGGCCGACATTGAAGTCGCCACCGAGCGTTTCGCCGGCAAGAAAATCTATCGCTGCGGCACCGGC ATTGCCTTGAAGCAGTCCGAAGCCACGCTGAAAAAAGCCCTGGCCGAAGGCAAGCAGGAAAGAGCTGCGAGCGACGGCAAAGCGCCGGCCAAGCAGGAGA AAAGCGGCGTCTACAAACACCTGCTGACCGGTGTGTCGTTCATGCTGCCGATGGTGGTGGCGGGCGGTCTGATGATCGCCTTGTCGTTCGTGTTCGGCAT CACCGCGTTCAAGGAAGAGGGCACGCTGGCGGCGGCGCTGATGCAGATCGGTGGCGAGACCGCGTTCAAATTGATGGTGCCGCTGCTGGCCGGTTACATC GCCTGGTCGATTGCCGACCGTCCCGGACTCGCGCCGGGCATGATCGGTGGTTTGCTGGCGAGTACCCTGGGCGCCGGCTTCATCGGCGGGATCGTTGCCG GTTTTATCGCAGGCTACGCGGCCAAGGCGATCAGTCGGTATGTGGCGCTGCCGCAAAGTCTGGAAGCGCTGAAACCGATTCTGATCATTCCGTTGTTCGC CAGTCTGTTCACCGGGCTGGTGATGATTTACGTGGTCGGCAAACCGGTGGCCGGGATGCTCGCGGCGCTGACGCATTTCCTCGACAGCATGGGCACCACC AACGCGATCCTGCTCGGTGTGCTGCTGGGCGGCATGATGTGCGTCGACCTCGGCGGGCCGATCAACAAGGCCGCTTATGCGTTCTCGGTGGGGCTGCTGG CCTCGCAGAGTTATGCACCGATGGCCGCGACCATGGCCGCCGGCATGGTGCCGCCGATCGGTCTGGGCATCGCCACTTTCATCGCCCGACGCAAGTTCGC CCAGACCGAGCGCGAAGCCGGTAAAGCGGCGCTGGTGCTGGGACTGTGCTTCATCTCTGAAGGGGCGATTCCGTTTGCTGCGAAAGACCCGTTGCGGGTG ATCCCGGCAAGCATTGCCGGCGGTGCGCTGACCGGTGCGTTGTCGATGTACTTCGGCTGCAAGCTGATGGCGCCGCACGGTGGGCTGTTCGTGCTGGCGA TTCCGAACGCGATCAACCATGCGCTGTTGTACCTGCTGGCGATTGTCGCGGGCAGTCTGCTGACCGCGGTGGTGTATGCGCTGGTCAAGCGGCCGGAAGC CGTGGAACTGGCGCTGGAGCCCGCGAAGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTGTCACACCCCTTTCATCTAGCGGTGCTTAAGTTTTCCTTTTTTCAGGGAGAACACCATGAGCGATTTCAATCCCGGTCGCCGGCGCGTGATGCAAGC CGTCGGCGCCGGACTGCTGATGCCGGGGCTGGCGCCGGCCGTGATCGCGTCGGTCAAGGATCGACCGCAACTCACTGACGGCGTGCAATCCGGCGACTTG CAGGGTGACCGCGCGATGATCTGGAGCCGCGCCGACCGCCCGGCGCAGATGGTGGTGGAGTGGGACACTCGCAGCCAGTTCCGCCATCCGCGCCGGGTCG TCTCGGCGCTGGCCGATGCCCGCAGCGATTTCACCGCCCGTGTCGAGCTCACCGGGCTGCCCGCCGATCAGGCGATTTTCTACCGCGTGTATTTCAAGGA CGCCCGCACCGGCGTCGCCAGTGAACCGTGGCTCGGTCACTTGCGCAGCGCACCGACGGCGCGGCGCAATATCCGCTTCGTGTGGAGCGGCGACACCGTC
Amino Acid Sequence
>PTS fructose transporter subunit IIBC
MKLAIVTACPNGMVTSVLCARLLDAAAQRQGWSTSVEVVDAAHPERELSAATIEAAEWVLLVATGPVDMTRFIGKKVFRIAPAQALQDVEEVLRRGAVEA EVYVADETPPVVASAQAPRLVAVTACPTGVAHTFMAAEALQQAAKRLGYDLQVETQGSVGARNPLSAAAIAEADVVLLAADIEVATERFAGKKIYRCGTG IALKQSEATLKKALAEGKQERAASDGKAPAKQEKSGVYKHLLTGVSFMLPMVVAGGLMIALSFVFGITAFKEEGTLAAALMQIGGETAFKLMVPLLAGYI AWSIADRPGLAPGMIGGLLASTLGAGFIGGIVAGFIAGYAAKAISRYVALPQSLEALKPILIIPLFASLFTGLVMIYVVGKPVAGMLAALTHFLDSMGTT NAILLGVLLGGMMCVDLGGPINKAAYAFSVGLLASQSYAPMAATMAAGMVPPIGLGIATFIARRKFAQTEREAGKAALVLGLCFISEGAIPFAAKDPLRV IPASIAGGALTGALSMYFGCKLMAPHGGLFVLAIPNAINHALLYLLAIVAGSLLTAVVYALVKRPEAVELALEPAKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site