Pseudomonas sp. GM25, PMI24_02192
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0008982 | protein-N(PI)-phosphohistidine-sugar phosphotransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01427
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0022877 | protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:cd05569
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01427
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system |
Inferred from Sequence Model
Term mapped from: InterPro:cd05569
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0005351 | carbohydrate:proton symporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01427
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF02378 | Phosphotransferase system, EIIC | IPR003352 | Phosphotransferase system, EIIC | 244 | 507 | 4.6E-16 |
| SUPERFAMILY | SSF52794 | PTS system IIB component-like | IPR036095 | PTS system IIB component-like superfamily | 119 | 216 | 7.67E-35 |
| NCBIfam | TIGR01427 | JCVI: fructose-specific PTS transporter subunit EIIC | IPR006327 | Phosphotransferase system, fructose IIC component | 227 | 563 | 0.0 |
| Pfam | PF02302 | PTS system, Lactose/Cellobiose specific IIB subunit | IPR003501 | Phosphotransferase system, EIIB component, type 2/3 | 5 | 94 | 1.3E-11 |
| CDD | cd05569 | PTS_IIB_fructose | IPR003353 | Phosphotransferase system, fructose-specific IIB subunit | 120 | 215 | 7.67344E-41 |
| CDD | cd05569 | PTS_IIB_fructose | IPR003353 | Phosphotransferase system, fructose-specific IIB subunit | 3 | 95 | 8.35707E-26 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 111 | 217 | 3.5E-39 |
| NCBIfam | TIGR00829 | JCVI: fructose PTS transporter subunit IIB | IPR003353 | Phosphotransferase system, fructose-specific IIB subunit | 121 | 204 | 6.1E-33 |
| Pfam | PF02302 | PTS system, Lactose/Cellobiose specific IIB subunit | IPR003501 | Phosphotransferase system, EIIB component, type 2/3 | 122 | 208 | 1.3E-18 |
| FunFam | G3DSA:3.40.50.2300:FF:000014 | PTS system fructose-like transporter subunit IIB | - | - | 114 | 221 | 3.0E-36 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 1 | 103 | 7.9E-22 |
| PANTHER | PTHR30505 | FRUCTOSE-LIKE PERMEASE | - | - | 109 | 567 | 0.0 |
| SUPERFAMILY | SSF52794 | PTS system IIB component-like | IPR036095 | PTS system IIB component-like superfamily | 2 | 97 | 1.31E-22 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.