Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0110860

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 Q378DRAFT_scaffold00008.8_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCGTGGTGTAGCCGACCACCATCTGCTGGCCGGTGCGCTCGGCCGATGCCTGGGCGTTCTGCTGCACCGGGAACAGCTCCGGCTCCTCGCTCCAGTACC AGCCCAGGCCGATGCAGACCAGCAGATACAGGCCGATCAGCGTACCCAGGGCACGGCTCCAGAGGCCGCCAACGTAACTACGGGCGGCGGCGCCGCGGCC GTCGACACGCTCGCGGGGCTCGGCTTTGGCCTCACGGTTTTTCCAGTCCAGCATGGCTTTGTCCTTAATCAGTCACGACGGTTCAGGGCTTGGACCACAG GCCTGCGCCAGGGTGCCACGGCAAGCCCGTGTCGCAGCACTATAAAGCAGACACCGCCTTACGCATAAGCGACCAATGAGTCAGGAACTGAATATCCGTT CCGAACGCTTTGTTGACATGGCGCGCTTATCGGCCCGAAAAGGGGTGCTAGCATGCAACCATCATTGCACCTGCATATCCCTCCAAAAAGTAGCCAGGAC
DNA Sequence for Gene
>Q378_RS0110860
ATGACCCACGTCGTACCGCCGAGCCCAGGACACCTCGAGCACGAGTTCGATCACATGCTGCAACGCTTGTCGCGTACCCGTGTGCGCAAGGGTGACCGAC TCGACCAACTGGCACTGCCACCGGCGCGCAAGCCGGTGTATCTGCTGTTGCCAGACCCGGAACCGGCCGAGCGCCTGGCGCAGCAGCTGGAGTTCTTTGG CTTGATCGCGCAGCCACTGTTCACGACCGAGTCGCTCATGGCGGCATTGACCGAGCAGACACCTGCCGCCATCGTCCTGGATGTCGACTTCGGCGGGCGC GGTTGTGGCCTGTCCCTGGCCACGCAAATGCAGCAAGGCCTTGAGAGCCCGGTCCCGCTGCTGTTCTTCAGTCTCCACGAAGCCGACACGCCGACCCGCC TGGCCGCCGTGCGCGCAGGGGGCCAGGCATTTCTCACCGGCACGCTGGAAGCGTCCAGCCTGCTGGAAAGGCTCGAGATCATGACCAGCACCGCCCAGTT CGAGCCCCTGCGCGTGCTGATCATCGACGACTCCCGCACCCAGGCCCTGCACACCGAGCGCGTACTGAGCTACGCCGGCATGACCACGCGCAGCCTGAGC GATCCGATCCGCGCCATGGCCGAACTCGCCGACTTCCAGCCCGACCTGATCATTCTCGACCTGTACATGCCGACCTGCTCCGGCCCGGAGCTGGCCAAGG TCATTCGCCACAACGACCGCTATGTCAGCGTGCCGATCATTTTCCTGTCCGCCGAGGACGACCTGGACAAGCAGCTCGACGCCATGAGCGAAGGCGCCGA CGACTTCCTGACCAAGCCGATCAGCTCGCGCCAGCTGATCACCACCGTGCGCAACCGTGCCGCGCGGGCGCGCTACCTGAAGTCGCGCATGATCCGCGAC AGCCTCACCGGGCTGTACAACCACACACATATCCTGCAACTGCTCGAGGACTGCAGCTTGCGCGCCCGCCGCGAAGGCCAACCTTTGAGCTTCGCCATGC TCGACATCGACCACTTCAAGAAGATCAACGACCGCCATGGGCACCCCATGGGCGACCGGGTGATCAAGAGCCTCGCGCTGTTTCTCAAGCAACGCCTGCG CAAGACCGATCTGATTGGCCGTTACGGTGGCGAGGAGTTTGCCATCGTCATGCCCGATACCACGCTGGAAGCTGCCTGCCGGGTGCTGGACGAAATCCGC CAGCGCTTTGCCGAAGTCCTCTACCCCGCGCAACCGCAGGATCTGCAGTGCACCTTCAGTGCCGGCGTGGTGCAACTGAACGAGACGCTGGATGCGCTGA CCATGGCCAGCTCGGCAGATGAAGCGTTGTACCGGGCCAAGCATGCGGGGCGAAACCGCGTGATGCAGGCGACGTCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCGTTGCCTCACGCAGGCATGGCATCAAGCCACTACCGTCATCACCACGTCACAAAATAGCAATAACTTCAGGCACCTACCTCCACTCCCCCCGCAGGA AGTTCGCGGCTATGCGCCTGAAGTGGCTGACCAATTTCAACACCCTGTTGCTGGTGACCGTGTGTATTGCCCTGGGTGCGACCCTGTGGTGGTCACAGCG CGCCCTGGAGCGCCCCTATCAATTGATGGAGCGCTACCTGAGCCTGTCACAGCTGTTCCAGAACCAGGCCGCACGCAACATCCAGGCTTACCTGGGCAAC GGCGACGCCGTACGCCATGCCTCGGCCATGGAAGCCAACCAGCAGTTGCAAGCGGCCTTGGCCGAACTGCCTGACGAGCTCGCCAGCCAGTTGCGGCCCA GCCTGGACGCTCTGAACGCCTACAGCGCCAACGAGCTGCTGGCGGCCGGCAAGCTGGCGGGCGACCCGCAAGCCTTGCTGTTGCAGGCCGAGCGGGAGCT
Amino Acid Sequence
>diguanylate cyclase
MTHVVPPSPGHLEHEFDHMLQRLSRTRVRKGDRLDQLALPPARKPVYLLLPDPEPAERLAQQLEFFGLIAQPLFTTESLMAALTEQTPAAIVLDVDFGGR GCGLSLATQMQQGLESPVPLLFFSLHEADTPTRLAAVRAGGQAFLTGTLEASSLLERLEIMTSTAQFEPLRVLIIDDSRTQALHTERVLSYAGMTTRSLS DPIRAMAELADFQPDLIILDLYMPTCSGPELAKVIRHNDRYVSVPIIFLSAEDDLDKQLDAMSEGADDFLTKPISSRQLITTVRNRAARARYLKSRMIRD SLTGLYNHTHILQLLEDCSLRARREGQPLSFAMLDIDHFKKINDRHGHPMGDRVIKSLALFLKQRLRKTDLIGRYGGEEFAIVMPDTTLEAACRVLDEIR QRFAEVLYPAQPQDLQCTFSAGVVQLNETLDALTMASSADEALYRAKHAGRNRVMQATS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site