Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0103635

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00088
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1512 1623 1.2E-28
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1512 1623 2.42891E-33
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1510 1623 3.2E-37
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 577 669 1.1E-13
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 575 696 2.75E-22
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1161 1342 2.26E-35
SMART SM00260 chew_2 IPR002545 CheW-like domain 1337 1481 4.4E-19
Gene3D G3DSA:3.40.50.2300 - - - 1512 1631 7.2E-43
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1350 1481 2.5E-20
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1512 1628 1.25E-37
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 439 528 2.52836E-10
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1344 1477 1.29E-22
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 295 408 1.29E-8
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 16 114 5.3E-8
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1305 1323 1.4E-11
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 871 968 3.5E-9
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 441 530 2.3E-12
CDD cd16916 HATPase_CheA-like - - 1167 1342 1.35765E-78
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1022 1159 9.8E-9
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 570 708 2.9E-20
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 871 969 1.1847E-11
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 575 661 7.75831E-10
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 870 1002 1.5E-29
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 716 836 1.77E-13
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1208 1344 1.3E-13
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 22 139 1.2E-9
Coils Coil Coil - - 1053 1080 -
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1329 1342 1.4E-11
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 438 562 7.72E-25
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 873 965 8.5E-17
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 717 843 4.1E-11
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 871 989 3.4E-28
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1159 1344 3.1E-52
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 23 135 3.01E-18
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1419 1479 3.3E-18
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1204 1345 1.2E-23
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 991 1621 0.0
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1160 1344 3.5E-61
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 439 536 0.057
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 439 569 2.9E-28
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1249 1263 1.4E-11
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 575 670 0.0031

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.