Pseudomonas chlororaphis YL-1, P637_RS0127815

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.10.380.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016788 hydrolase activity, acting on ester bonds
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.10.380.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043022 ribosome binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.10.380.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil Coil - - 35 62 -
Pfam PF09000 Cytotoxic IPR009105 Colicin E3-like ribonuclease domain 322 398 2.4E-26
Gene3D G3DSA:3.10.380.10 - IPR036725 Colicin E3-like ribonuclease domain superfamily 316 401 2.3E-27
Pfam PF06958 S-type Pyocin IPR016128 Pyosin/cloacin translocation domain 181 311 1.6E-26
MobiDBLite mobidb-lite consensus disorder prediction - - 376 401 -
SUPERFAMILY SSF63840 Ribonuclease domain of colicin E3 IPR036725 Colicin E3-like ribonuclease domain superfamily 320 400 7.19E-27
SUPERFAMILY SSF69369 Cloacin translocation domain IPR036302 Pyosin/cloacin translocation domain superfamily 186 359 1.01E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.