Pseudomonas chlororaphis HT66, M217_RS0116175

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000028, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGCACAGCAATGGCGTGCTCAGCCGCCTGCGTCCCTGGGCGATCGAAGATCATCCGCTGCCCGGCCCCAAGGGCCGCGGTGCGATCCTCGTGCGTTTCG GCGATGGGCCCGAAGCCTTGGTAGTGGTGATGATGCACCTGGCCCTCGGTGCCCGTACGCGCACCCGGCAGTTGGCTTATATCCGCGAGATGATCGGCGG CTACAAGCATCAGGTGCTGATGGGCGACATGAATACCCATGCCAGCGATCTGCTGGAGCATTCGCCCTTGCGTGACCTCAGTTTGCTGGCGCCGCAATTG GAAGCGACTTTCCCCAGTTGGCGCCCACAACGCTGTCTTGATCATATTTTGCTCAGCCCCAGCCTGACGCTGGAGCGGGTCGAGGTCCTGGCCCAACCGA TTTCCGATCACCTGCCGGTCGCGGTAGAGATTCGTCTGCCGGGTTCGCTCACGGCCGATGCATTGCCCGCGCTGAGTCCTGCCCCTCGCGGAACCCATGA
DNA Sequence for Gene
>M217_RS0116175
ATGAGCGACGACGCCCAGCGCTGGAAAGAGAAATACCTCAAAAGCATCGAACAACAGGAAAAACTCGAACGGCGCTGGAATGCCCGTCTCGACCTGCTTC GTCGTGGCCTGGTGCGCAGCACGCTGGCGGCCGAGGGCACTGACCGCGCTGTCGATCAGTGCATGAAGGAAATGCGCGAAGTAGTGCGCACCGACGACAT GGACGCGGCCTTGGCGGCCCTGTTGCCGCGCCTGGAAAAAGCCGTGCTGGACTCCGAACAGCGCCGGGAGACCCGTGTCGAGCAAATGAGCACGGCCCTG ACCTCGCTGGTCAGCCAGTTGCAGAAATTACCGCTACCCCGCGAGGTGAGCCGGCCGCTGAAAAGCTTCGCCAAGCAACTGGATGGCCGTGTCGGCCAGG CTCGGGAAATTCCGCTGTTGCTGGGTGAACTGAGCGGTCTGCAAAGCAAGGCGCTGAGCCTGTTGGAGAGCCCCGCGGAGCCGAGCCGCCCAGGCTTGTT GCAGCGCCTGTTCGGTGGTCGCGATGCTGACGAAGCGGCGGTATCGTCCGAAGCTGCGCCGCTTGCGGTGGTGGCGAGCCCGGCCTCAGCTCCGGCACCG TCGCCGGCAACGGCTGAAACAGTCACGGCTGACATGCTCTCGCCTCAGGCCGAGGCCGAGCTTGCGCGGTGGTCCGAAACGTTGGAGCCGGTGTCCCCTC CCTCGGTGGAAAAGGCTGTTGCCGCTGCCAGCCAGGCGCTCGAAGTGCAGCCGGAATCGCCGCCCGAGGCCGCTGCTGTCCAGGTCACGGCCTTCGTGCC GCCGGTGCTCGAGCCGGAGAAACCCGTCGCTGCGGAGCCGGCGCCACAGGTGCCAGACTTGTCCGCACCAGCACCAGCACCAGCACCAGCACCAGCACCA GCACCGGCAGTTGTACCTGCCCCCGCGCCGCAGCCGTCAACCGAGTCTGAACCCGACGATTCGCCGGTGCCTGCGCAGCCCCCGGTTACCGAAGCTTCGG TCAGCAACCCGGACGAACTGATTTTTGCTGCACCCACCGAGGCGACTCCGGCGCCCGTGTTGCTCGACCGCTTGCCATTGCCGGCAGCCATGGCCGAGGC GCTTGCGGCGATCGACCCGCAGCAGGCCGAGCAGGATGTGCTGTATGCCCTGCCCGATTCGCCGGAGCCGTCCTACAGTTCGGTGGCCAAGCATATCGAA CATACCCTGCTTGGCCTTCTGGATGACCTGAGCCTGCCAGAGCGTCATCGGCCGCAAGCCGAGTCCATGCGCGATCGTTTGCAACATGGGCTGAACTGGT ACGAATTGCTGCCGATCCTCGACGATCTGGCGGTCTTGATGCTGGCGATCACCGACAGTGGCCAGCATGAGTTCGAGGCCTATCTCAAGCGGCTCAACGA GCGCCTGGAATCCTTCCAGAGCAACCTGCAGGCCGCCAGCGAGGGCCATGCCGACAGCAGTTCGGCGGCGCGGGAGATGGACTCGCAGATCCGCGAACAG GTCGATGGCTTGCAAAACAGCGTGCAGGAGGCGGCCGATCTGGACGACCTCAAGCAGGTGCTGGAAAGTCACCTGGAAGGCCTGCTCGGCACCATGGACC ATCACCAGAAGCAGCGTGACGAGCGCGAGAAGGAAGTGGCCGCACGGCTGCAGAGCCTGGCCGAGCGGGTATCGAGCATGGAACAGGAGGCCCAGGGTTA CCGCGAGCACCTGGAAGAGCAGCGGCAGAAAGCGCTGATCGACCCTCTTACCGGCCTGCCCAATCGGGCGGCCTGGAGCGAGCGCCTGGAGTATGAAGTG GCGCAGTGGCAGCAACACGGCAACACCTTGCTGCTGGCGATGCTTGATCTCGATCACTTCAAGAGCATCAACGACAACTACGGTCACCTGGCCGGCGACA AGGTGCTGAAGATCATCGCCGGCGTGCTGCGCAAGCGCCTGCGCGGCAACGATTTCATCGCCCGTTTCGGCGGTGAAGAGTTCGTCCTGCTGATGCCCAA TACCACCTGTCCGATCGGGGCGCGCCTGGCGGAAACCTTGCGAGCGGCCATCGAAGCCTGTCCGTTCCACTTCAAGGGCGAGCGCGTGACCATCACCATG TCCATCGGCATGAGTGCCTTCAAACCGGGAGAACGCAGCGATCTGGTGCTCAAAAGAGCCGATCAGGCGCTCTATCGGGCCAAGGAGGCGGGGCGCAACC GGGTAGAACTGGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCATAATTTGTTCCATTTTGTATAAACCGGTGCTTTTGCCGGTTTTCCGCCAAGGCAGTACGTTACACTGTTGCATTATTTTCCCCAGCGTACTGCCTT TTGCCATGAAAGTTCTTGTCCTCGCCTTGTCCCTTCTGTTGCTGGCCGGTTGCGCCAGCGGCCCACGTTTCAATACCAGCCACCCTTCGGTCAACTTCGA TGAACGGGTGCAATTCGTGGTGGTGCATTACACCTCGGCCTCGATGGAGCGCTCCCTGCAACTGCTGACCCATGGCCAGGTCAGCAGCCACTACCTGATC GGCGACGACAAGGCGGCGACCATCTACAAGCTGGTGGACGAGCAATACCGCGCCTGGCATGCCGGCGAGAGCCAGTGGCAAGGCCGTACCTGGCTGAACT CCAGCTCCATCGGGATCGAGATCGTCAACCCGGGCTTTCGCGACCTGCCCACCGGGCGTGTCTGGTACCCCTACAGCGAAGCGCAGGTCCAGAGCCTGAT
Amino Acid Sequence
>DeoR faimly transcriptional regulator
MSDDAQRWKEKYLKSIEQQEKLERRWNARLDLLRRGLVRSTLAAEGTDRAVDQCMKEMREVVRTDDMDAALAALLPRLEKAVLDSEQRRETRVEQMSTAL TSLVSQLQKLPLPREVSRPLKSFAKQLDGRVGQAREIPLLLGELSGLQSKALSLLESPAEPSRPGLLQRLFGGRDADEAAVSSEAAPLAVVASPASAPAP SPATAETVTADMLSPQAEAELARWSETLEPVSPPSVEKAVAAASQALEVQPESPPEAAAVQVTAFVPPVLEPEKPVAAEPAPQVPDLSAPAPAPAPAPAP APAVVPAPAPQPSTESEPDDSPVPAQPPVTEASVSNPDELIFAAPTEATPAPVLLDRLPLPAAMAEALAAIDPQQAEQDVLYALPDSPEPSYSSVAKHIE HTLLGLLDDLSLPERHRPQAESMRDRLQHGLNWYELLPILDDLAVLMLAITDSGQHEFEAYLKRLNERLESFQSNLQAASEGHADSSSAAREMDSQIREQ VDGLQNSVQEAADLDDLKQVLESHLEGLLGTMDHHQKQRDEREKEVAARLQSLAERVSSMEQEAQGYREHLEEQRQKALIDPLTGLPNRAAWSERLEYEV AQWQQHGNTLLLAMLDLDHFKSINDNYGHLAGDKVLKIIAGVLRKRLRGNDFIARFGGEEFVLLMPNTTCPIGARLAETLRAAIEACPFHFKGERVTITM SIGMSAFKPGERSDLVLKRADQALYRAKEAGRNRVELG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site