Strain | Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00011.11_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCAGGGCGGCGACATCGACATCGCCATCAGTCCGCAACTGGCGACCATCGGCACTTTGCTGGCCCACGTCCGGCGCGGGGACATTGTCAGCGTGCACTCA CTGCGCAGGGGCGCGGCGGAAGCCATCGAGGCAATTGCCCACGGCGATGCGAAGTCGAGCAAGGTGATAGGCAAGGCCATCGAAAACATCGGCCTGCCAC CGGGCACCACCATCGGCGCGATCATCCGCGACGAAGAAGTGATCATCGCCCACGACGACACCGTGATCGAAACCGGCGACCATGTGATTCTGTTCCTTGT GGATAAGAAGCATATTCGGGACGTGGAGAAGCTGTTCCATGTGGGGCTGAGCTTCTTCTGATCCGAAGGCCTCTTCGCGGGCAAGCCTCGCTCCAGGTTT GAGCCGTCCAGCTATTATGCGAACGACTGAACCGTGTAGGAGCGAGGCTTGCCCGCGAAGGCGATTTCGAACTCCCCCAAAAAACCAGAGGTGCCACCCA
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DNA Sequence for Gene |
>N519_RS0115945
ATGATCGAATCCCTGGAAAAAATGCTCGCCAAGGGTGTGGATAACTCATTGCTGCGCTTCGGCCTGGGCAAGGGTTATCTGGATCTTGGGGAAAACGCCA AGGCCGCAGAGCATTTCCAACGCTGCGTCGAGTTCGATCCGAAGTATTCGGCAGCCTGGAAGCTCTTGGGCAAGGCCCATTTGGCGCTGGCGGATTACGC GGCGGCGCGGCAGGCCTGGGAACAGGGCCTGGAAGCCGCCCGCGCTCATGGCGACAAGCAGGCGGAGAAAGAGATGACGGTGTTTCTGAAAAAGCTTGAG CGACAGACGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCAGCGATAACGCAGGCCAAGATCAATAGAACGCAGCCTGCTGAGTTATCCACAGCAGCGTCAATACCAGCGTGCTTCGCCCGGTGGACGCTTCTTGAAG CGCTTCATGCTCCACATGTACTGGCTCGGATAAGCCCGCACGTAGCGCTCGACTACCTGGCTCATGGCCGCGCAGGAGGTTTCGGTATCGGTGCTGTACA TGGCCTCTGGCGCGGCTTCGAGAATCACTTTGTAACCCGAACCGTCCGGCAGCCGCAGGGCATGCAGGAACACGCCGACCGCTTTGCCACCGGCGAGCAT GTTCGGCACGAATTTGCTGGTCAGGGCCTGAGTGGCGAAGAACGGCACGAAGATCCCGGCGGATTCGGCCGGTTCCGGGTCAGCCGGAATGCCCACCGCG CCACCCTTGCGCACTTCCTTGATCACGCTGAGGATGCCTTCCTTGGTGGAAGCCGCCACCCGGTTACCCAATTGCACCCGCTGCTTGCGCAGCAACTCAT
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Amino Acid Sequence |
>hypothetical protein
MIESLEKMLAKGVDNSLLRFGLGKGYLDLGENAKAAEHFQRCVEFDPKYSAAWKLLGKAHLALADYAAARQAWEQGLEAARAHGDKQAEKEMTVFLKKLE RQTH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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