Pseudomonas umsongensis UNC430CL58Col, N519_RS0105365

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF69279 Phage tail proteins - - 189 362 2.55E-37
FunFam G3DSA:2.40.50.230:FF:000001 Type VI secretion protein VgrG - - 355 457 6.1E-62
Pfam PF05954 Phage tail baseplate hub (GPD) - - 30 329 1.2E-105
FunFam G3DSA:3.55.50.10:FF:000001 Actin cross-linking toxin VgrG1 - - 98 189 4.2E-43
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 355 457 1.5E-44
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 364 452 5.75E-35
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 24 506 0.0
Gene3D G3DSA:2.30.110.50 - - - 15 331 0.0
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 386 453 2.1E-14
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 11 523 0.0
Gene3D G3DSA:3.55.50.10 - - - 98 189 0.0
SUPERFAMILY SSF69279 Phage tail proteins - - 11 184 2.3E-61
PANTHER PTHR32305 - - - 36 533 1.1E-91
MobiDBLite mobidb-lite consensus disorder prediction - - 465 483 -
SUPERFAMILY SSF69349 Phage fibre proteins - - 442 617 3.53E-40
Gene3D G3DSA:4.10.220.110 - - - 224 286 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 465 485 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.