Pseudomonas umsongensis UNC430CL58Col, N519_RS0105165
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACGCCTGCTGCCGTACCTCGGCCTGCTCAGCTTGCGGGCGCACTCGGCGGCGTTGATCGAAGCGGTGCTGCGCTACTACTTCAAGCACGCCGAGCTGACG ATCGAACAGTGCATCGAGCGCCGCGTCGAAATCCTCGACGAGCAGCGTAATCGCCTCGGTCGCGGCAACAGCATGCTCGGCGAAGACCTGGTGCTGGGTG AACACGTACGCGACCGCAGCGGCAAATTCCGCATTCACATCCGCGAGCTCGACTGGCAACGCTTTCACGAATTCCTGCCGATCGGTTTCGGCTACCAGCC GCTGTGCGCGCTGGTTCGGTTCACCCTGCGTGACCCGCTCGATTACGACATTCGCCTGGTGCTGCGCCAGGAAGAAATCCGCGAACTTCGCATCGGTGAG CAGAACGCCTGTCGCCTGGGGTGGACCAGTTGGCTCGGCCGCGAAAAAGCGGATGGCGTGGTGACCCTGGGCAGCAAAATTCATTAAGGACAGATGACAC
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| DNA Sequence for Gene |
>N519_RS0105165
ATGATCAACGTAGACCTGCAACAACTTATCCAGGCGCTGGACGCCGAAACCCGTCGTGATCTGGAAAGTTCTGCCGAACGCTGCGTCGCCCGTGGCGGCA GCAAGATCCTCGTCGAAGACTTGCTGCTGGGCCTGCTGGAGCGTCCGCAAGGTCTGCTCGCACGGGCGTTGCAGGATGCCGAAGTGGACGCTGGCGAGCT GAGCGCCGCGCTGCAATCGCGGGTCGAGCACAGCGCCTCGCGCAACCCGGTGTTCGCCCCGGAGCTGGTGCAGTGGCTGCAAGACGCCTTGCTGGTGGCC AACCTCGAACTGGGCCAGAGCCAGGTCGAGCAGGCCGCGTTGATCCTCGCATTGCTGCGCAACCCGATGCGCTATGCCGGCAGCCGTTATCAGTCGTTGC TGGCCAAGCTGAACATCGAGCGCCTGAAAGAATTCGCCCTGTCGCAGAAAGAACAACCGGCCACCGGCAAACCGGCGGTGCCCGGCGAATCGCTGCTGGA GCGCTTCACCCACAACCTGACCCAACAGGCCCGCGACGGCAAACTCGACCCGGTGCTGTGCCGCGATGGCGCGATCCGTCAGATGGTCGACATCCTCGCT CGTCGGCGCAAGAACAACCCGATTGTGGTGGGTGAAGCGGGGGTCGGTAAAACCTCCATCGTCGAAGGCCTGGCCTCGCGCATCGCCGCCGGTGAAGTGC CGCAAGTCTTGAAAGGCGTTGAGCTGCTGTCGCTGGACATGGGCCTGTTGCAGGCCGGCGCCAGCGTCAAAGGCGAGTTCGAACGTCGCCTCAAAGGCGT GATTGACGAAGTCAAAGCCTCGCCGAAGCCAATCATCCTGTTCATCGACGAAGCCCACACCCTGATCGGCGCGGGCGGCAACGCCGGCGGTTCCGACGCG GCCAATCTGTTGAAACCGGCCTTGGCCCGTGGCGAGTTGCGCACCATCGCCGCCACCACCTGGGCGGAGTACAAAAAATACTTCGAGAAAGACCCGGCCC TGGCCCGTCGTTTCCAACCGGTGCAGCTGCACGAACCGACTGTCAGCGAAGCGGTGACCATTCTGCGTGGCCTGGCTCAGGTCTACGAGAAGAGCCACGG CATCTACCTGCGCGATGACGCGGTGGTTGCTGCGGCCGAATTGTCCGCCCGTTACCTGGCGGGTCGTCAGCTGCCGGACAAGGCCGTCGACGTGCTCGAC ACCGCCTGCGCCCGCGTACGCATCAGCCTCGCCGCAGCCCCGGAAAGCCTGGAACGCCTGCGTGGCGAGCTGGCCGAAGGTGGCCGCCAGCGTCAGGCCC TGCGTCGTGACGCCGAAGCCGGTCTGCTGATCGATCACGAAGCGCTGGACGCTCTGGAAGATCGCCTGGCCGACGCCGAGGACGAAAAGGTCGCCCTCGA AACGCTGTGGACCGAGCGGAAAGAACTGGCCGAGCGCCTGCTGGAATTGCGTCAGCAACTGGCCAAGGCTCGCGAAGCCGCCGCCGAGCTGACCATCACG GTCGAGGAAGACGCCGAAGGCACCGTGATCGAAACGTTGCCGGTGGACGAAGCGCAAAGCGTTGAAACCCTGGAAACCGCGCTCAACGAAACTCACAAAG CGCTGACCGAGCTTCAGGTCAAAGAACGCCTGGTGAGCTTCGAAGTCTGCCCGCGTCTGGTGGCCGAAGTGATCAGCGCCTGGACCGGTGTGCCATTGGC GCAACTAGCCCGCGAACACAACGCCAAGGTCGCAAGCTTCGCCACCGACCTGCGCACCCGTATTCGTGGTCAGGAACAAGCGGTTCATGCGCTGGACCGT TCGATGCGTGCCACCGCTGCTGGCCTGAACAAACCTGATGCACCGGTCGGCGTGTTCCTGCTGGTCGGCCCGAGCGGCGTTGGCAAGACCGAAACCGCGC TGGCCCTCGCTGATTTGTTGTACGGCGGTGATCGTTTCATCACCACCATCAACATGTCCGAGTTCCAGGAGAAGCACACCGTGTCGCGTCTGATCGGTGC GCCGCCGGGCTACGTCGGTTACGGCGAGGGCGGCATGCTCACCGAAGCCGTGCGGCAGAAACCGTACTCGGTGGTGTTGCTTGATGAAGTCGAAAAAGCC GACCCGGACGTGCTCAACCTGTTCTACCAAATCTTCGACAAAGGCGTGGCCAACGACGGGGAAGGGCGCGAGATCGATTTCCGCAACACGCTGATCCTGA TGACCTCGAACCTGGGCAGCGACCGCATCAGCGAACTCTGCGAAGACGGTGCGCGGCCGACCGCCGAAGTCCTCGAAGAAACCATTCGCCCGGTGCTCAG CAAACACTTCAAACCGGCATTGCTGGCGCGCATGCGCGTGGTGCCTTACTACCCGGTGGGCGGCCCGGTGCTGCGCGAGCTGATCGAAATCAAACTCGGT CGTTTGGGTGAGCGCCTGAACCGCCGTCAGCTGGATTTCACTTACTCCCAGGACCTCGTCGATCACCTGGCCGAACGCTGCACTCAAAGCGACAGCGGCG CGCGCCTGATCGACCACTTGCTCGACCTGCATGTGCTGCCGTTGGTGGCCGACCGTTTGCTCGATGCGATGGCCACCGGTGAAAGCCTCAAGCGCGTGCA TGCGACGCTCGACGGCAATGCCAGCGTGACGTGCGAGTTCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTGGGTGTGATGTTCACTCAAGTGCCGCAACCGCTGGTCTATGCCGAAGCCTTGCTGGCGCAGTTCGCCAGCCTGTCGCGGGCGGCGGACAGCACTGTG CTGCTGGGTGACTTCGTGCGCGGCCTGGCCGAGCTCAGCGGTTGCGAGCTGACGCAGTTGTACCTGCTGGACGCGACCCACACCTGCCTGGGGATGAACG CCGAGTGCCTGAACGGCGTTCTGCAACCCCGGGAAGGGGCCAGCCTGCCGGCGGATTACAACGGTGAACAACTGCTGCAATACGCCCTGTGCCAGAACCG CGTGGTGTGCCTCAGCGAGCTGAGCGGCAGCCTGCACGAAACCAGTTTCCTGCCACCCCAGGCCATGCCCTGGCAGTCGCTGCTGTGCGTGCCGCTGGTC AATCAGCAGAAGGCTGTCGAAGGGTTGCTGCTGTGCGCCAGTCGCCGGGTAATCGACCTGCAAGGCTTTGCCGATTCCCTCGGTCAACTGGGCTCGTTCG
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| Amino Acid Sequence |
>ATPase AAA
MINVDLQQLIQALDAETRRDLESSAERCVARGGSKILVEDLLLGLLERPQGLLARALQDAEVDAGELSAALQSRVEHSASRNPVFAPELVQWLQDALLVA NLELGQSQVEQAALILALLRNPMRYAGSRYQSLLAKLNIERLKEFALSQKEQPATGKPAVPGESLLERFTHNLTQQARDGKLDPVLCRDGAIRQMVDILA RRRKNNPIVVGEAGVGKTSIVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKGVIDEVKASPKPIILFIDEAHTLIGAGGNAGGSDA ANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLAQVYEKSHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLD TACARVRISLAAAPESLERLRGELAEGGRQRQALRRDAEAGLLIDHEALDALEDRLADAEDEKVALETLWTERKELAERLLELRQQLAKAREAAAELTIT VEEDAEGTVIETLPVDEAQSVETLETALNETHKALTELQVKERLVSFEVCPRLVAEVISAWTGVPLAQLAREHNAKVASFATDLRTRIRGQEQAVHALDR SMRATAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGDRFITTINMSEFQEKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKA DPDVLNLFYQIFDKGVANDGEGREIDFRNTLILMTSNLGSDRISELCEDGARPTAEVLEETIRPVLSKHFKPALLARMRVVPYYPVGGPVLRELIEIKLG RLGERLNRRQLDFTYSQDLVDHLAERCTQSDSGARLIDHLLDLHVLPLVADRLLDAMATGESLKRVHATLDGNASVTCEFA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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