Pseudomonas umsongensis UNC430CL58Col, N519_RS0105165

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00300
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF17871 AAA lid domain IPR041546 ClpA/ClpB, AAA lid domain 348 440 1.7E-28
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 693 711 2.0E-34
Pfam PF02861 Clp amino terminal domain, pathogenicity island component IPR004176 Clp, repeat (R) domain 26 73 9.3E-5
Coils Coil Coil - - 417 437 -
FunFam G3DSA:3.40.50.300:FF:000025 ATP-dependent Clp protease subunit - - 568 784 3.3E-82
Pfam PF00004 ATPase family associated with various cellular activities (AAA) IPR003959 ATPase, AAA-type, core 208 339 2.1E-10
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 568 784 2.6E-66
PANTHER PTHR11638 ATP-DEPENDENT CLP PROTEASE - - 17 869 0.0
CDD cd00009 AAA - - 188 339 1.13558E-15
CDD cd19499 RecA-like_ClpB_Hsp104-like - - 583 784 5.78778E-80
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 165 527 4.04E-72
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 158 347 2.1E-71
Gene3D G3DSA:1.10.1780.10 - IPR036628 Clp, N-terminal domain superfamily 5 152 8.6E-25
NCBIfam TIGR03345 JCVI: type VI secretion system ATPase TssH IPR017729 AAA+ ATPase ClpV1 13 869 0.0
Coils Coil Coil - - 521 541 -
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 664 682 2.0E-34
SUPERFAMILY SSF81923 Double Clp-N motif IPR036628 Clp, N-terminal domain superfamily 17 127 1.0E-11
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 348 562 3.8E-44
Gene3D G3DSA:1.10.8.60 - - - 789 880 6.5E-9
SMART SM01086 ClpB_D2_small_2 IPR019489 Clp ATPase, C-terminal 786 878 1.4E-6
Pfam PF07724 AAA domain (Cdc48 subfamily) IPR003959 ATPase, AAA-type, core 615 780 1.8E-42
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 564 852 7.22E-58
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 203 348 1.5E-10
FunFam G3DSA:3.40.50.300:FF:000010 Chaperone clpB 1, putative - - 156 347 1.5E-84
Coils Coil Coil - - 442 469 -
Coils Coil Coil - - 473 500 -
Pfam PF10431 C-terminal, D2-small domain, of ClpB protein IPR019489 Clp ATPase, C-terminal 791 858 2.0E-10
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 619 637 2.0E-34
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 615 765 1.9E-9
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 726 740 2.0E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.