Pseudomonas aeruginosa PACS2, A0K_RS13155
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTTGAGGTAGAGGATCTCCAGCACCCGCTGCACCGAACCGGGCTCGCAGCACTGGCGGAGAAAGCCCATGCCGGCGCGCAGGAGGATGTCCAGCGCCGGC ACCCTGGCGTTTTCGTCGGGTACCTCGATCTGGCCGAAGGCGCGGTCGCACATCGCCAGGCAGACCTCGATCTTGTTCTTGTAGTGGCCGTAGACCGCAC CGCGAGAAACCCCGGCGGCGTCCGCCAGGTCGGCCATGGCAGTAGTGCCCACGCCCTTTTCCAGGAAAACCCGCTCGGCGGCATCGAGTATGCCGTCGCG GGTTTTCTGGGATTCCTCTTTGGTTTTCCTGGCCACTGAACGTCCTCACAAGGGAAAGGCGCCGCAGATCATAAGGATATGTTACAGAAACGCCAATTAA TTAATCACTCATGATTGATTATATGCTACTGTCGCGCCGCTCGTGAGTTGCGGTGCCCTTTCCCGGGCAAGCTCGCGAGTTCACGAATCGAGGGACACCC
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| DNA Sequence for Gene |
>A0K_RS13155
ATGCACATCCAATGGACCGGCTCGCTGCGCGGGCTGCTGGCGGCCCTGGTCGCCCTATTCCTGCTGGGCTGCGAAGAAGCAGCGGACGCCGGGAAGACTG CGGAGGCCCCCGCCGAGGTCGGCGTGATCGTCGCCAGGCCGGCGCCCATCGGCATCACCAGCGAGCTGCCCGGACGCCTGGAAGCGTACCGCCAGGCTGA AGTGCGGGCGCGCGTCGCCGGCATCGTCACCCGTCGCCTGTACGAGGAAGGCCAGGACGTCCGCGCCGGCACCGTGCTGTTCCAGATCGACCCTGCGCCC TTGAAGGCGGCCCTGGACATCAGCCGCGGCGCCCTGGCCCGGGCCGAGGCCAGCCACGCGGCGGCGGCCGACAAGCTCAAGCGCTACGCCGACCTGATCA AGGACCGCGCCATCAGCGAACGCGAGTACACCGAAGCGCAGACCGACGCGCGCCAGGCCCTGGCGCAGATCGCCTCGGCCAAGGCCGAACTGGAGCAGGC CCGCCTGCGCCTGGGCTACGCCACGGTCACCGCGCCGATCGACGGCCGCGCGCGGCGTGCGCTGGTCACCGAAGGCGCGCTGGTCGGCGAGGACTCGCCG ACACCGCTGACCCGCGTCGAGCAGATCGATCCGATCTACGTGAACTTCTCCCAGCCGGCCGGCGAAGTCGCCGCCATGCAGCGGGCGATCCGCGAAGGCC AGGTGAAGGGTGTCGCCGACAAGGACATCGCCGTGCGCCTGGTCCTGGCCGACGGCAGCGAGTACCCGCTGGCCGGCGAGCTGCTGTTCTCCGACCTGGC GGTCGACCCCGGCACCGACACCATCGCCATGCGTGCCCTGTTCCGCAATCCGCATCGCGAATTGCTGCCCGGCGGCTACGTGCAGGTGCGCCTGCAGCGC GCGGTGAACCCGCAGGCGATCACCGTCCCGCGCGACGCGCTGATCCGTACCGCCCAGTCCGCCGTGGTCAAGGTGGTCAACCCACAGGGCGTGGTGGAAG ACGTGGAGGTCCGCGCCGACACCCTGCAGGGCCGCGACTGGATCATCAGCCGCGGGCTCAAGGGCGGCGAGCGGGTGATCGTCGAGAACGCCGCCCAGCA TGCCGCCGGCTCCAGCGTCCAGGCGGTGGTCCGCCAGCCGGCCAGCGCCGACGCCCCCTCACCGCTGGCCGCCTCGCCGGCGGGCCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGAGAACGCTACGAATGGCTCGTTTCTTCATTGACCGGCCGGTCTTCGCCTGGGTGATCTCCCTGCTGATCGTGCTCGCCGGGGTCCTGGCGATCCGCT TCCTGCCGGTCGCCCAGTACCCGGACATCGCGCCGCCGGTGGTCAACGTCAGCGCCAGCTATCCCGGCGCCTCGGCCAAGGTGGTCGAGGAAGCGGTGAC CGCGATCATCGAGCGCGAGATGAACGGCGCGCCCGGCCTGCTCTACACCAAGGCCACCAGCAGCACCGGCCAGGCCTCGCTGACCCTGACCTTCCGCCAG GGCGTGAACGCCGACCTCGCCGCGGTGGAAGTGCAGAACCGCCTGAAGATCGTCGAGTCGCGCCTGCCCGAATCGGTGCGGCGCGACGGCATCTACGTGG AGAAGGCGGCGGACAGCATCCAACTGATCGTTACCCTTACCTCCTCCAGCGGCCGCTACGACGCCATGGAGCTGGGCGAGATCGCCTCGTCCAACGTGTT
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| Amino Acid Sequence |
>hemolysin D
MHIQWTGSLRGLLAALVALFLLGCEEAADAGKTAEAPAEVGVIVARPAPIGITSELPGRLEAYRQAEVRARVAGIVTRRLYEEGQDVRAGTVLFQIDPAP LKAALDISRGALARAEASHAAAADKLKRYADLIKDRAISEREYTEAQTDARQALAQIASAKAELEQARLRLGYATVTAPIDGRARRALVTEGALVGEDSP TPLTRVEQIDPIYVNFSQPAGEVAAMQRAIREGQVKGVADKDIAVRLVLADGSEYPLAGELLFSDLAVDPGTDTIAMRALFRNPHRELLPGGYVQVRLQR AVNPQAITVPRDALIRTAQSAVVKVVNPQGVVEDVEVRADTLQGRDWIISRGLKGGERVIVENAAQHAAGSSVQAVVRQPASADAPSPLAASPAGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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