Pseudomonas putida KT2440, PP_2622 (tssE3)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KT2440 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCTACCGAGGTGCTGATATCCGACCGCAAGGAATTCGAACTGGCCGAAGAGGGCTTCATCGCCCTGACCATGCGTAAAGACAGCGACAACGCCGCGTTCT TCTCCGCCAACTCGGTACAAAAGCCCAAGCACTTCCCGAAAACCCCTGAGGGGCTTCAGGCACAGACCAACTACAAGCTGGGTACCCAGTTGCCCTACCT GTTCATCGTCAACCGGCTCGCCCACTACATCAAGGTGCTGCAGCGCGAGCAGATCGGCAGTTGGAAAGAGCGCCGTGACCTTGAGTCCGAGCTGAACAAA TGGATCAAGCAGTACGTCGCCGACCAGGAGAACCCGTCTGCCGACGTTCGCAGCCGCCGGCCGCTGCGTGCCGCCCGTATTGAGGTCTCGGATGTTGCGG GTGACCCGGGCTGGTACCAGGTTTCGCTCGCCGTACGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAGATTTCCCTGGTCGGGCGGCTCGATACGCA
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| DNA Sequence for Gene |
>PP_2622
|tssE3
ATGAGTGGTCTTTTTGATCGCCTGATGGTGGACCAGTGCACCCGCCGAGAGGCCTCCCGACGGGAGAGCGCTTCCCACAAGTTCGCCGCCATCAAGCGCC ACCTCGAAACGCTGCTGAATGCCCGCCAGGGGTGCTCCCAGAGCAGCCCTGAGCTGGGCCTGCGCGACTTCAATGGGCATGACGTGAGCAACGGCGACTT GCTTGTGCAGGTGAGCGCGGATATCCGCCGCACCCTCCAGCGCTTCGAGCCGCGCATACAGGTACGCACGCTCAACGCAGTGCCCGATACCCATGCCCCG CTGGAGCTGCATTTCAGGCTGGATTGCCTGGTACAGGTCAACAACCACGCAGAACAGCTGCAACTCGAGCTGCTGGTCGATGGGCACAACCGCTACACGC GCGTGAGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGATGTCTCTGAGAGACCGTTTCAGTGAAGAACTGCGTTACCTGCACGAACTGGGGAACGACTTTGCCAAGGACAACCCACAACTCGCGCGGTTGCTTG GCAAAGGTGCCAGCGACCCCGATGTCGAACGCCTGATGGAAGCCTTTGCGTTCCTGACCGCCAAGCTACGGCTGAAGCTGGAAGACGACTTGCCAGAGCT GACCCATCCCATGCTGCAGTTGCTGTGGCCGAACTACCTGCGGCCGCTGCCCAGCGCGACGATCATCAAGTTCAGCCCGGTGAGACAATCCCTCAGCCAG TCACAGCGCATCCCAAAGGGGTCGCGGCTGTTCTCGAAACCGGTAGACGGCGTGGCCTGCGAGTTCCGCACCTGTACAGCGGTCAACATTCATCCGTTCG AGATCGACACGGTCGCAGCCACCCAGACATCCGACAGTTCTGTGATCTGCATCGGCCTGCAATCACTGGTCGAGCGGCCGTTGAACAGCCTGGGCTGTAC
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| Amino Acid Sequence |
>TssE3
MSGLFDRLMVDQCTRREASRRESASHKFAAIKRHLETLLNARQGCSQSSPELGLRDFNGHDVSNGDLLVQVSADIRRTLQRFEPRIQVRTLNAVPDTHAP LELHFRLDCLVQVNNHAEQLQLELLVDGHNRYTRVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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