Pseudomonas putida KT2440, PP_2622 (tssE3)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF160719 | gpW/gp25-like | - | - | 28 | 128 | 1.96E-17 |
| PANTHER | PTHR38595 | CYTOPLASMIC PROTEIN-RELATED | - | - | 3 | 135 | 3.3E-14 |
| Gene3D | G3DSA:3.10.450.40 | - | - | - | 12 | 128 | 6.5E-12 |
| NCBIfam | TIGR03357 | JCVI: type VI secretion system baseplate subunit TssE | IPR017737 | Type VI secretion system protein TssE1-like | 2 | 133 | 1.3E-36 |
| Pfam | PF04965 | Baseplate wedge protein gp25 | IPR007048 | IraD/Gp25-like | 29 | 115 | 9.5E-19 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.