Pseudomonas resinovorans CA10 (NBRC 106553), PCA10_RS04475
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans NBRC 106553 DNA, complete geonome. [Details] | |
| DNA Sequence Upstream of Gene |
CGTATTGAGCCAAAGTGCAGCACTCCCTAAAAAAGACAAAAAGGCGCCAAAAGTCCGCGCATATTAGCAAATGCGGCCGCCGAACTGCCCCAGTTTCAGC CCTCCGGCACGGCGCCGGGCCCTCCGCCCGACATTCGGCCGCACGATCGTCGTGCATCCGGAGGGGGTCAAGACAGCCCGGATCCTGCCGATAAGCTGCG GACAGGGCGGGAGTGGCAAGGAACGATCGCCCCGCGCGCGGAACTACCGGAATGCACCAGGGAGGGCAAACGATATTCGTCGGTCGTACTGGCACTTTAC AGGCCGTCAAGGCATGCTAGCCGGCCCGCGGACCGAGGGTCCGGGACGCCCCGCCACCTGCCAATCGAGCAGTAACAGCAGGAACGCAATCCGTGCCAAC CAGCCCCCTCTCTCCACCGCCGAGCGAGCCAGGATCTCCCCTGGCCGGTGCCCCCACGCGCCGTTCGGTCAAAGGGCTGCTGGTGGGCCTGGTGCTACTG
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| DNA Sequence for Gene |
>PCA10_RS04475
ATGCTGACCCTGCTGCTCTGGCAGCTGCATCAGGAATATCGCCAGCTGCAGGAAGGCGCACGGGATCGCAACTACACCCTGACCCGCGAGCTGGCCAGCC ACCTCGAACTGGTCATGCAATTGAAGGCCGACGCGGTCATCGCCCTGCTGCGCCAACGCGAGCCGGAGTCCAGCAACGAGAACCAGCGCCTGGCCGCCCT CGACCTGCTGCGCCCGCTGCTGCCGGCCTCGCGCAGCCTGGCCTGGCTCAACCCCAATGGCGGCGTGCTGGCCGACACCCAGCCCGATAGCGACGACGAA TTGTTCCTCGCCAACCTGGTGCAACGCGCCGAAGGGCAGGTCTACCACTACGCCTTCAGCCCCGTGGGGCGTGGCGAGGTGTACCTGGTCCTGCGCCAGT CGCCGTTCCCCGAGCCCAGCGGTTACTGGGTCCTGCGCATGGACGCCGAGGCCATCCGCACCTGGCTGCTCAAGCACGAGGACCGCGATTACCGCTGGCT GCTGGAGGACCACTTCCTGCAACGGGTCCTGGCGCAGAGCGGCCGCACCGTCCACAGCCCGATCATCATGCCGGTGACCGCCGAGCAGGAAGGCCAGACC ATCCTCGTCTCGGCCCTCGGCCACAGCGACTGGCAACTGCGCGCCCTGCACGACGAGCGCCAGGTACGCGCCCACCTGCTGCCGGAACTGCTCAGCAAGC TGCTGCTGTTCTTCATCGCCGCCAGCCTGGCGTTGATCGCCCTGTACTTCCTGCAGCGCGAACAACGTGGCCTGCGCGCCCTCAACGACGCCTCGCGGCG CTCCCTGCGCCAGGCAGCCAGCGCCCTGGGGGTGATCGAGGAACGGGTGCTGGTGACCCAGGTGGACGGTCGCGTGAGCTACCTCAACCCCCAGGCCGAG AGCCTGTTCGGCGTCAGCGGCGCGGCCGCCCAGGACCATCACCTGCTGGCCCTGCTGCCAGGCCTTGACCCGCTGCTGCTCAATACCCCCGGCCTGGACC ACCAACTGGTCTCGGACCTGGTGCCGTTTGAAAACGGCCATGAGCAGCGCCTGCTGGCCGTGACCCGCAATGACCTCACCGATGGCGCGCAACTGCTCGG CTACGTCTGGGTACTGCGCGACGTCACCGAGGAACAGCACGCCCTGCGCGTCCTGCAGGAAACCCGGCGGCGCTACCAGGACATCTTCGAGGGCGGCGGC ATCGCCCTCTGCGTGCTCGACCTCGCCGAGCTGCGCAAGCACCTGATCCAGCAGGGCATGCGCGACCGCGCCAGCCTGGCCGCCTGGCTCCGCGCCAACC CGCAGCGCCATCCGGAACTGTTGAAGCTGTTGCGCATCACCGAGATCAACCAGGTGGGCATGCGCCTGCTGGAGGTCAACAGCAACGAACAGGCCTGGCG CCAACTGATCGGCAGCCAGCCACTGCGCGAGGGCGGCATCCGCTTCCAACTGATGACGGCCTTGCTGGGCGGCAGCAAGCATCTTGAAATGGAAAGCCAG TTCGTCACGCCCCAAGGCCAGGTGCGGCACATCTGGCTGGTGGTGCACCTGCCGGACATGATCCAGGACCTGGAAGCCGTCACCCTCAGCATCAACGACA TCACCAGCCGCAAGGAAGTGGAGCTTTCGCTGATCGAGCGCGAGCGCTTCTGGTCCGACGTGGTGCTGGCGCTGCCCGACACCCTCTATGTCCACGACAT GATCGACAAGCGGGTGATGCTCACCAACAACCGCCTGGCCCCGCAGCTGGGCTACGACCGCGACGACATCCGCAGGATGGGCGAGCGCTTCTGGGAGTCG GTGCTGCACCCGGACGACGCCGAACTCTACTCGCGCGTGCGCAGCCTGCAGCAGGTGGTGGGCGATGGCATGCTGCTGCAGTGCCAGCTGCGCTGGCGCC ACAAGGACGGCAGCTGGCGCTGGTTCGACGTACGCGAGCAGGCCCTGTCCCGCGACGACAACGGCCGGGTCAGCCGCCTGATCGGCGTGGCCAAGGACAT CACCGAACAGATCGAAGCCACCGAGTCCATGCGTGAGAGCGGGCGCCGCTACCGCATGCTCGCCGAAAGCATCAGCGACGTGATCTTCACCACCGACAGC GAGCTGCAGCTCAGCTACGTCAGCCCCTCGGTGCTGCCGGTGCTCGGCTACAGCGCCGAATGGACCATCGCCAACGGCTTCCAGGGCATGTCCGCCGACC CACGGCAGATGGTCAACCTGTTCGAACAGCTGGAGCATATCCGCAACGCCCTGGGCAATCCCCAGCGCCTGGCGGAACTGCGCACCCAGATGCCGGCGCG CCTGTTCCTCTTCGACTGCATGCGCGCCGATGGCCAGAAGATCCCGGTGGAACTGCGCACCATGCTGATGTGGGACGAGTACGGCCGCTTCGAAGGCATG CTCGGCGTCGGCCGCGACGTCAGCCAGCAACGCCGCGCCGAGAAGGACATGCGCATGGCGGCCACGGTATTCGAGCACTCCACCTCGGCCATCCTGGTCA CCGACCCGGCCGGCTACATCGTCCAGGTCAACGAAGCCTTCTGCCGCATCACCGGCCACGCCGCCAGCGAGGTGCTGGACCAGTTGCCGGCGATGCTCAC GGCCGACCGCCAGCAGGCCAACCAGCTCACCTTCATCATCAGCCAGCTCAACCAGCGCGGCAGCTGGGAAGGCGAGATCTGGCTCAAGCGCCGCGAGGGC GACAGCTACCCGGCCTGGGTCGGCATCACCGCCGTGCACGACGAGGAAGGCGACCTGGTCAGCTATGTCTGCTTCTTCAGCGACATCAGCGAGCGCAAGG CCAGCGAACAGCGCATCCACCGCCTGGCCTACTACGACGGCCTGACCCACCTGCCCAACCGCACCCTGTTCCAGGACCGCCTGCATACCGCCTTGCAGTA CGCCGAGCGGAACCAGGAATGGGTGGTGCTGATGTTCCTCGACCTCGACCGCTTCAAGCCGATCAACGACTCCCTCGGCCATGCCGCCGGCGACCGCATG CTCAAGGACGTGGCTGTGCGCCTGGCCACCTGCGTGCACGAGGACGACACCGTGGCGCGCATGGGCGGCGACGAGTTCACCCTGCTGCTGCAGCCGCGCG CCACCCGCGAAGGCGCGCTGAACCAGGCCATCCATGTGGCCGAACAGATTCTCGGCAACCTGGCCCGCCCCTTCGTCCTCGAAGGCCGCGAGTTCTTCGT CACCGCCAGCATCGGCATCGCCCTCTCGCCCCAGGACGGCCGCGAGTTGAGCCAGCTGATGAAGAACGCCGACACCGCCATGTACCACGCCAAGGAACGC GGCAAGAACAACTTCCAGTTCTACCAGGCCGACATGAACGCCCGCGCGCTGGAGCGCCTGGAGCTGGAAAGCGACCTGCGCCATGCCCTGGAGCAGGGCG AGTTCCTGCTCTACTACCAGCCGCAGTTCTCCGGCGACGGCAAGCGCCTGACCGGCGTCGAGGCCCTGCTGCGCTGGCGCCACCCCAAGCGCGGCCTGGT GCCGCCGAGCGAATTCATCCCGGTACTCGAAGAGCTCGGCCTGGTGGTGCAGGTCGGCGACTGGGTGCTGGCCGAGGCCTGCCGCCAGCTCAAGACCTGG CACCAGGCGAAGATGCGCCTGCCGAAGATCTCGGTGAACCTCTCCGCCCGCCAGTTCGCCGATGGCCAGCTGGCCGAACGCATCGCCGCGATCATCGACG ACTGCGGCCTGCCCCCGGCCTGCCTGGAGCTGGAACTGACAGAGAGCATCCTGATGCGCGACGTCGGCGAGGCCATGGCCATCCTGGAGAACCTCAAGCG CCTGGGCCTGTGCATCGCGGTGGACGACTTCGGCACCGGCTACTCCTCGCTCAACTACCTCAAGCAGTTCCCCATCGATGTGCTGAAGATCGACCGCAGC TTCGTCGACGGCCTGCCCGATGGCGAGCGGGACGCCCAGATCGCCCGCGCGATCATCGCCATGGCCCACAGCCTGAACCTGGCGGTGATCGCCGAAGGCG TGGAAACCCCGGCCCAGTTGGGCTTCCTCCGCGAGCACGGCTGCGACGAAGTGCAGGGCTACCTGTTCGGCCACCCGATGCCGGCGGTCCAGTTCGAGCG GCTGTTCGGCGCCGCCACCGACTTCATCCTCAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGCCAGCTCCCACCGCAATGGCCACATGAAGCCCGCTTGTCTGTCACATGACCGACCTTCATATGCCAGCCCGCGACCGATCAGGTAGAATGCGCCCC TTTCCCAGTACCGATCCTTAAGAGGACCGCCATGTTCAGCCGTGATTTGACCCTCGCCCGCTACGATGCAGAACTCTTCGCCGCGATGGAGCAGGAAGCC CAACGCCAGGAAGAGCACATCGAGCTGATCGCCTCCGAGAACTACACCAGCCCGGCGGTGATGGAAGCCCAGGGCTCGGTACTGACCAACAAGTACGCCG AAGGCTACCCGGGCAAGCGCTACTACGGCGGCTGCGAATACGTCGACATCGTCGAGCAGCTGGCCATCGACCGCGCCAAGGAGCTGTTCGGCGCCGACTA CGCCAACGTCCAGCCCCACGCCGGTTCCCAGGCCAACAGCGCCGTCTACCTGGCCCTGCTGTCGGCCGGTGACACCATCCTCGGCATGAGCCTGGCCCAC
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| Amino Acid Sequence |
>diguanylate cyclase
MLTLLLWQLHQEYRQLQEGARDRNYTLTRELASHLELVMQLKADAVIALLRQREPESSNENQRLAALDLLRPLLPASRSLAWLNPNGGVLADTQPDSDDE LFLANLVQRAEGQVYHYAFSPVGRGEVYLVLRQSPFPEPSGYWVLRMDAEAIRTWLLKHEDRDYRWLLEDHFLQRVLAQSGRTVHSPIIMPVTAEQEGQT ILVSALGHSDWQLRALHDERQVRAHLLPELLSKLLLFFIAASLALIALYFLQREQRGLRALNDASRRSLRQAASALGVIEERVLVTQVDGRVSYLNPQAE SLFGVSGAAAQDHHLLALLPGLDPLLLNTPGLDHQLVSDLVPFENGHEQRLLAVTRNDLTDGAQLLGYVWVLRDVTEEQHALRVLQETRRRYQDIFEGGG IALCVLDLAELRKHLIQQGMRDRASLAAWLRANPQRHPELLKLLRITEINQVGMRLLEVNSNEQAWRQLIGSQPLREGGIRFQLMTALLGGSKHLEMESQ FVTPQGQVRHIWLVVHLPDMIQDLEAVTLSINDITSRKEVELSLIERERFWSDVVLALPDTLYVHDMIDKRVMLTNNRLAPQLGYDRDDIRRMGERFWES VLHPDDAELYSRVRSLQQVVGDGMLLQCQLRWRHKDGSWRWFDVREQALSRDDNGRVSRLIGVAKDITEQIEATESMRESGRRYRMLAESISDVIFTTDS ELQLSYVSPSVLPVLGYSAEWTIANGFQGMSADPRQMVNLFEQLEHIRNALGNPQRLAELRTQMPARLFLFDCMRADGQKIPVELRTMLMWDEYGRFEGM LGVGRDVSQQRRAEKDMRMAATVFEHSTSAILVTDPAGYIVQVNEAFCRITGHAASEVLDQLPAMLTADRQQANQLTFIISQLNQRGSWEGEIWLKRREG DSYPAWVGITAVHDEEGDLVSYVCFFSDISERKASEQRIHRLAYYDGLTHLPNRTLFQDRLHTALQYAERNQEWVVLMFLDLDRFKPINDSLGHAAGDRM LKDVAVRLATCVHEDDTVARMGGDEFTLLLQPRATREGALNQAIHVAEQILGNLARPFVLEGREFFVTASIGIALSPQDGRELSQLMKNADTAMYHAKER GKNNFQFYQADMNARALERLELESDLRHALEQGEFLLYYQPQFSGDGKRLTGVEALLRWRHPKRGLVPPSEFIPVLEELGLVVQVGDWVLAEACRQLKTW HQAKMRLPKISVNLSARQFADGQLAERIAAIIDDCGLPPACLELELTESILMRDVGEAMAILENLKRLGLCIAVDDFGTGYSSLNYLKQFPIDVLKIDRS FVDGLPDGERDAQIARAIIAMAHSLNLAVIAEGVETPAQLGFLREHGCDEVQGYLFGHPMPAVQFERLFGAATDFILS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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