Pseudomonas trivialis IHBB745, AA957_RS22855
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas trivialis IHBB745
GCF_001186335.1|latest |
| Locus Tag |
AA957_RS22855
|
| Name |
Synonym: AA957_22865 |
| Replicon | chromosome |
| Genomic location | 5043043 - 5043666 (+ strand) |
Cross-References
| RefSeq | WP_049712187.1 |
| GI | 903255274 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
TetR family transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.83 |
| Kyte-Doolittle Hydrophobicity Value | -0.048 |
| Molecular Weight (kDa) | 23.2 |
| Isoelectric Point (pI) | 6.04 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4MXM | DNA BINDING PROTEIN | 09/26/13 | Crystal structure of superantigen pfit | Pseudomonas fluorescens | 1.95 | X-RAY DIFFRACTION | 93.9 |
| 4MO7 | TRANSCRIPTION | 09/11/13 | Crystal structure of superantigen PfiT | Pseudomonas fluorescens A506 | 1.701 | X-RAY DIFFRACTION | 93.7 |
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000241 (6008 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: AA957_RS22855
Search term: TetR family transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.