Pseudomonas parafulva YAB-1, XB13_RS21400
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas parafulva strain YAB-1 contig14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGAACGCCGCGATCCAGGCCTCGCTGGCGGGTGAGGCAGGGCGGGGGTTCGCCGTGGTCGCGGACGAGGTCCAGCGCCTGGCCGAGCGCTCGTCCTCTGC CACGCGGCAGATCGAAGCCCTGGTGCGGACCATTCAGGCCGACACCAACGAAGCGGTCATTTCCATGGAACAGACCACGGCCGAAGTCGTGCGCGGCGCC AGGCTGGCGCAGGACGCCGGCGTGGCGCTGGCTGAGATCGAAGGGGTTTCGCAGAACCTTGCCGACCTTATCCACAGCATTTCCGATGCGGCCCAATTGC AGACGTCCTCGGCGGGGCAGATCTCACACACCATGGCCGTCATCCAGCAGATCACCGCCCAGACGTCCGCAGGTTCCAGCGCCACCGCCGACAGCATTCG TCACCTTGCGCGCATGGCCAGCGAGATGCGCCGTTCGGTCTCCGGATTCACCCTGCCGGCACCTGCCGAGCCCCATTGAGAAATGCCCATGTCCACGCCC
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| DNA Sequence for Gene |
>XB13_RS21400
ATGCCCGGCCCCATTGCTGGCCCTGCCCGCCACGATACCGTGGGCCTGGCCTGGACCAAGGCTGCCCTGCTCGATTGCCTGGGGCAGGGGCGCCAGGCGC TGGAACGTTTTGCCGGCGAGCCTGAAGACCTGTCGTTACTCACCTTCGTGGCGGACAACCTGCACCAGGTACACGGTTGCCTGGTGATGCTGGAGTTGCC TGGGGCAACGCGCCTTGCCCAGGAGCTGGAGATGCTCGTGACCGACCTGGCCAACGGTAAGGTCACCCCGCGAGGCGACTGCCTGGGGGCGCTGTTCAAG GGCCTGGAGCTGTTGCCTTCCTACCTGGAACGTCTGCGCGGTGCACGCCATGACTTGCCACTGGTGATGTTGCCGCTCCTGAACCAGCTGCGTGCCTGCC GGGGCGCGGAACCGGTGGTTCATGGCCGCCTGCTCGGCAATGCAGGCCAGCGTCTGGCAGGTGCCCAGGACCTGGCGAACCTTGACGTGTCATTGGGCAA CTGGCGCGAGCAGTTGCAGGCTGGGGAGGGCCGCGACGCGCTAAGGTCGGTAGTGGCGGCATTGTGTGACGACCTCATGCGCATCAAGGACCGCCTGGAC CAGTTCGTGCGCAGCGACCGGCAGCACAATGAACAACTGGAGGTGTTGCTCGCGCCCCTGCGCCACGTGGCCGATACCCTGGCCGTGCTGGGTTTCCAGC AGCCGCGTCGGGTCATCATCGATCAAGTGATGACGCTGCAAGGGCTGGCCGAGGGCGATCGGGCCGTGGATGACGCGGTGCTGATGGATGTGGCGGGGGC CTTGTTGTACGTGGAAGCCACGCTCAACGGCATGGTCGGGCCACTCGAAGAAGGGGGGGAGCCAGGCCTGCCGGGCGCCGATGTCGCCGAGATTCGCCTG GTCGTGCTGCGAGAGTCGCTGAACGTGTTGCAGCAGGCCAAGGACCTGATGGGCGATTGCCTGGAGTCGGGCTGGCCCCGTCAGCACCTGCAGGCCTTGC CAGGCTTGCTCCAGCAGGTGCGCGGCGCCCTGGCCATGCTGATGTTGCCGGCCGCTGCCGAGGTGTTCGCGCGCTGCACGGTGTTTGTCCAGGGCTGGGT ACAACAGGCGCAGGCCGACCCCTCGTCCGAGGAACTGACGCTGCTGGCCGAAGCCTTGAGCGCTGGCGAATGCTATCTGCAATGGCGCGTGGCCGACCCG CTGGCCGACGCTCAGCGCTTCATCGTCATGGCTCGCGAGCGCCTGGGGGCGTTGGGCGTGCACTGTTCCACCGTTGAAGAGCATGCCGATCTGGAAGAGG CGGATGGCCTTCAGGACGAATTGCGTGGCGTATTCATCGAAGAAGCCCAAGCATTGCTTCAGGACATTGAGCGGCACTGGTTGACTTGGCGTGCCGACCA CCAGCAGCACAACGCGCTGATCGAAGTGCATAGGGCATTGCATACGCTCAAGGGCGCAGGCCGCCTGGTGCATGCCCAGGCGTTGGCAGAGCTGGCCTGG GCCGCCGAGCACTTGCTCAACCGTGTGCTTGCCGGCCGCAACGTGCTTGGTGCGGACGGGCAGATGGCGCTTGAGCAAGCGTTCGCGCAACTGCCCGAGG TGCTCGCCGACTTCGCCGCGGGGCACCTGCCGCATGTGAGCGCCGTACAGCAACTGGTGGGCCACCTGCATGCCCTTGCCGAGCGCGACCTGCCAGCCGC GGCCAGCGCGCAGGGGCTCGACCCGCAGTTACTGGACATCTTCCGTGGCGAGGCCCAAGGCCACCTGGCCAGCCTCGACGGGTTCCTGGCAAATGCCCAG CACGGCGTCCCTGTAGACGACGCCCTGCAGCGGGCCTTGCACACCCTCAAGGGCAGTGCGGCCATGGCCGGAGTTGTGCCCATCGCCGAACTTGCCACCG TGTTCGACCGACTGGTGCGCGAGTACAAGGCGCACGACCTGCTGCTCGATGAAACGGAGCTGCACTGGCTCAAGTCCGCCGCCTCGATGTTCGGGCAGGG CCTGGCGCAGTTATCCACCACCCCGTTCGAGCCACTGCCTGGTGCGGCCCAATTGATCGAGCAGGTCGAGTTGGCCATCGATACGCGCATCGCCGCCCTG GGCGGCGATGCGCATGCCTCGACCGGCAACGCCCGCGACCCGCAACAGGTCGCAGCTTTCCTGTCGCAAGCCATGGATCGTTTGCTGGACGCCGAGTCGT TGCTGGCCGACTGGCAGCGGCGCCCGGCTCAACGGGCGGCCTTGGAGACACTGCTCGATGACATGACCGAGCTTGCCCATGCCGCCCATTCGGCCGATCT GTGGCAGGTCGATGAGGTGTGCGAAGCCTTGCTGGACCTGTACGGTGCAGTGGAGGAGGGCAGCCTGCCTGCCGATGCGCAGTTCTTCACCCATGCCCAG CACGCCCACGAGGCGCTGCTGGACATGCTCGACGAGCTGGCTGCCGGCCAGGACGTCGTCCCGCGTACGCCGCTGGTGGCTCGCCTGCGCGAACTTCAGG GGCAAGGGCTTGCACCCGATGCCACCGGGCGCGTGGGCCTCGACAGCGTCACACCGCTGCACCCGGACATGGACGTGCAACTGATCGACACGCCAGCCCC AGACCTGGCCCTCGACCCCGCGCCAGTGCCGCCGTCACAAGCTCCGGAAAGCGCCGGGGAAGAGCTGATGGAGGTTTTCCTCGAAGAAAGCTCGGACATC GTCGAGAGCGCCGCTGCAGCGCTGGCGCGATGGCAGGCCGACCCGCGCAGCACGGTGGAGGTGGACAACCTGATGCGCGACCTGCACACCCTCAAAGGGG TGGCACGCATGGTCGAAATCGGCCCCATCGGTGACCTGGCCCATGAACTGGAATTTTTGTACGAGTTGCTCGCGGCAGGGCGCCTGCCACCGAGCGGGGC CCTGTTCTCGCTGTTGCAGAACTGCCACGACCGCCTGGCGCACATGCTCGATGCGGTGCGCCTGGGGCAACCGCTGCACGCCGCCACGGCGCTGATCGAT TACATCCGCAACTTCAGCAGCGCAGGCCTGACCGACAGCGCGGCCGGCACCAGCCCGGTCGAAACTGCCGCCAGCGAAGGTCCGGCAGTAACCCCCGAGC GAGTGCCGGGGGACATGGTCAAGGTCGATGCCGAATTGCTGGACGACCTGGGCAACCTGGCCGGTGAGCACTCGATCATCCGTGGACGCATCGAGCAGCA GGTCAATGACGCCCAGTTCACCCTCAACGAAATGGAAACCACGCTCGAGCGCATGCGTGACCAGCTGCTGCGCCTGGATATCGAAACTCAGGGGCGGATC TCCAGCCGCCAGCAGCTGGAAGGCGATGTCTATGAAGACTTCGACCCACTGGAAATGGACCGTCACTCCCAGCTGCAGCAGTTGTCGCGGGCGCTGTTCG AGTCGGCCTCGGACCTGCTGGACCTGAAGGAAACCATGGCCCAGCGCGCCCAGGAAGCCTACGGCCTGCTCCAGCAGCAGGCGCGGGTCAACAGCCAGTT GCAGGAGGGCCTGACGGCAACGTTGATGGTGCCTTTCGAACGCCTGGTGCCGCGCTTGCAGCGCGTGGTGCGGCAGGTGGCGAGCGAGCTGGGCAAGCAG GTCGAGCTGGTGGTGGGCAACGCCGAGGGCGAGCTGGACCGCAGTGTGCTGGAACGCATGGTGGCGCCGCTTGAACACATGTTGCGCAATGCCGTCGACC ATGGCCTGGAAAGCCGCGAAGCCCGATTGGCTGCGGGTAAGCCTGAGCAGGGCACGATCCACCTGAACCTGCTGCACGAGGGGGCGGACATCGTCATCGA GATGACCGACGATGGCGCCGGCGTACCCCTACAAGCCGTCCGACTCAAGGCGATCAAGCGCGGCCTGCTCGACCCGCAGGCACAGCTGAGCGACCACGAG ATACTGCAGTTCATCCTCAGGCCGGGCTTTTCCACGGCCGAAAAGATCACGCAGATCTCAGGGCGAGGCCTGGGCATGGACGTGGTCCACGAGGAGGTCA AGCAGTTGGGCGGCTCGATGACCATCGAGTCGGCCCAGGGCAAAGGGGCGCGTTTTCAGATTCGCCTGCCGTTCACGGTGTCGATCAACCGCGCGCTGAT GGTGCACCTGGGCGACGAGCAGTACGCCATCCCGCTCAACACCATCGAAGGCATCGTGAGGGTACCGCCCGCTGAGCTGGCAGGTTGCTACGAGCAGGAG CCGCCGCGCTACACCTACGCAGGCCATCAGTACCAGCTGCGCTACCTGGGCGAGCTGGTGCAGGGCGCGCCGCGTCCTACGCTGCTGGGCCAGAGCGTGC CGCTGCCCTTGTTGCTGGTGCATTCACAGGAGCAGTCGTTCGCCATTCAGGTCGACAGCCTGTCGCCCAGCCGGGAGATCGTGGTCAAAAGCCTGGGCCC GCAGTTTGCGGCCGTTGCCGGCCTGTCGGGTGCAACGCTGCTGGGGGATGGGCGCGTCGTGTTGATTCTCGACCTGTTGGGGCAATTGCGTGGCCAGCAA CGGCGGCTTGCTCGTTTGCCTGGAGGCACGCCGCGTGGGTTGCTGCCGGCAGCGACCCCGGACCGCACCTTGCTGGTGATGGTGGTAGACGATTCGGTCA CGGTGCGCAAGGTCACCAGCCGCCTGCTTGAGCGCCATGGCATGAGCGTGATCACCGCCAAGGACGGGGTGGATGCCATGGCGGTGCTGGAAGGGCACCG GCCCGATGTGTTGCTGCTGGATATCGAAATGCCGCGCATGGACGGTTTCGAAGTGGCGACCCGCATTCGTCAGGACGCCCGCCTCAAGGCGCTGCCCATC ATCATGATCACCTCGCGTACGGGGCACAAGCACCGCGACCGAGCCATGGCCATCGGGGTCAACGAATACCTCGGCAAGCCTTATCAGGAGTCGGTCTTGC TGCACAGCATACTCCGGTGGAGCCAGTCCCATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACTGATAGCCGGGCAGCGCAGCAGCCTTACCGGGCTGTTGCTGCCATTGGGCGACCGTACGTTGGTGCTGCCCAATGTGGCCGTAGCCGAACTCAGTGGG CTGCGCAATGTAGCGTGTCAGCGCGGTGACCTGCCCTGGCACCTGGGCTGGGTCGACTGGCGCCAGCAGCGCTTGCCCCTGATCGGCTTCGAAGCGGCCT GTGACAGCCATACGCCCTGTGGAGAACGGGCCCGTGTGGTGGTGCTCAACGCACTGGGCGACACGGGGTTGCGTTACCTGGCCTTGTTGCTGCAAGACAT ACCGCGCTCGTGCAAGCTCGACAGCCAGCTCAACTACGTTGACGTGGCGTTGGCACCCCTTGAGTTGGCCGCTGTCCAGGTAGGGGATCAGGTGGCGCGC GTGCCTGACCTGGTCGGGCTCGAGCGCCTGGTCAGGGACGCACAGCGCAGCGGCAGGCTGCAAACGCCGGGTTAGAGCGTGCCGCCGGTACGCGTCGAGT
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| Amino Acid Sequence |
>chemotaxis protein CheA
MPGPIAGPARHDTVGLAWTKAALLDCLGQGRQALERFAGEPEDLSLLTFVADNLHQVHGCLVMLELPGATRLAQELEMLVTDLANGKVTPRGDCLGALFK GLELLPSYLERLRGARHDLPLVMLPLLNQLRACRGAEPVVHGRLLGNAGQRLAGAQDLANLDVSLGNWREQLQAGEGRDALRSVVAALCDDLMRIKDRLD QFVRSDRQHNEQLEVLLAPLRHVADTLAVLGFQQPRRVIIDQVMTLQGLAEGDRAVDDAVLMDVAGALLYVEATLNGMVGPLEEGGEPGLPGADVAEIRL VVLRESLNVLQQAKDLMGDCLESGWPRQHLQALPGLLQQVRGALAMLMLPAAAEVFARCTVFVQGWVQQAQADPSSEELTLLAEALSAGECYLQWRVADP LADAQRFIVMARERLGALGVHCSTVEEHADLEEADGLQDELRGVFIEEAQALLQDIERHWLTWRADHQQHNALIEVHRALHTLKGAGRLVHAQALAELAW AAEHLLNRVLAGRNVLGADGQMALEQAFAQLPEVLADFAAGHLPHVSAVQQLVGHLHALAERDLPAAASAQGLDPQLLDIFRGEAQGHLASLDGFLANAQ HGVPVDDALQRALHTLKGSAAMAGVVPIAELATVFDRLVREYKAHDLLLDETELHWLKSAASMFGQGLAQLSTTPFEPLPGAAQLIEQVELAIDTRIAAL GGDAHASTGNARDPQQVAAFLSQAMDRLLDAESLLADWQRRPAQRAALETLLDDMTELAHAAHSADLWQVDEVCEALLDLYGAVEEGSLPADAQFFTHAQ HAHEALLDMLDELAAGQDVVPRTPLVARLRELQGQGLAPDATGRVGLDSVTPLHPDMDVQLIDTPAPDLALDPAPVPPSQAPESAGEELMEVFLEESSDI VESAAAALARWQADPRSTVEVDNLMRDLHTLKGVARMVEIGPIGDLAHELEFLYELLAAGRLPPSGALFSLLQNCHDRLAHMLDAVRLGQPLHAATALID YIRNFSSAGLTDSAAGTSPVETAASEGPAVTPERVPGDMVKVDAELLDDLGNLAGEHSIIRGRIEQQVNDAQFTLNEMETTLERMRDQLLRLDIETQGRI SSRQQLEGDVYEDFDPLEMDRHSQLQQLSRALFESASDLLDLKETMAQRAQEAYGLLQQQARVNSQLQEGLTATLMVPFERLVPRLQRVVRQVASELGKQ VELVVGNAEGELDRSVLERMVAPLEHMLRNAVDHGLESREARLAAGKPEQGTIHLNLLHEGADIVIEMTDDGAGVPLQAVRLKAIKRGLLDPQAQLSDHE ILQFILRPGFSTAEKITQISGRGLGMDVVHEEVKQLGGSMTIESAQGKGARFQIRLPFTVSINRALMVHLGDEQYAIPLNTIEGIVRVPPAELAGCYEQE PPRYTYAGHQYQLRYLGELVQGAPRPTLLGQSVPLPLLLVHSQEQSFAIQVDSLSPSREIVVKSLGPQFAAVAGLSGATLLGDGRVVLILDLLGQLRGQQ RRLARLPGGTPRGLLPAATPDRTLLVMVVDDSVTVRKVTSRLLERHGMSVITAKDGVDAMAVLEGHRPDVLLLDIEMPRMDGFEVATRIRQDARLKALPI IMITSRTGHKHRDRAMAIGVNEYLGKPYQESVLLHSILRWSQSHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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