Pseudomonas viridiflava LMCA8, RT94_RS04060

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008519 ammonium transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43029
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0072488 ammonium transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43029
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43029
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00909 Ammonium Transporter Family IPR024041 Ammonium transporter AmtB-like domain 38 443 1.4E-119
FunFam G3DSA:1.10.3430.10:FF:000007 Ammonium transporter - - 20 445 0.0
SUPERFAMILY SSF111352 Ammonium transporter - - 32 424 9.81E-130
NCBIfam TIGR00836 JCVI: ammonium transporter IPR001905 Ammonium transporter 36 443 0.0
Gene3D G3DSA:1.10.3430.10 Ammonium transporter AmtB like domains IPR029020 Ammonium/urea transporter 23 445 0.0
PANTHER PTHR43029 AMMONIUM TRANSPORTER MEP2 IPR001905 Ammonium transporter 24 445 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.