Pseudomonas viridiflava LMCA8, RT94_RS02175

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAAGGGAACTGCACGCATGAGTTACGAAGAAGACAGTCAGGCCAACAGCGCTCTCATCACCCGCTTTTATGAAGCGTTCGCTCAGCTGGACGCCGAGGCA ATGAGCGCCTGTTACACCGACGATGTGCTGTTCAGCGATCCGGTGTTCGGCGAGTTGCGTGGCCGTCAGGCAGGTGACATGTGGCGCATGCTCACGTCGC GTGCCAAGGACTTCTCGGTGGTGTTCGATCAGGTGCGTGCAGACGACCGTTCCGGGAGCGCCCACTGGGTGGCGACCTACCTGTTCAGCCAGACCGGGCG CACAGTGGTCAACGACATTCAGGCGCGCTTCGTGTTTCGCGACGGCCTGATCTGCGAGCATCATGACCATTTCGACCTGTGGCGCTGGTCGCGTCAGGCC CTGGGTGCAAAAGGCCTGCTGCTGGGCTGGACGCCGATGGTGCAAAACGCGATTCGCGGCCAGGCGCAGAAGGGGCTGAAAACCTTTACCGAGAGCCGCC
DNA Sequence for Gene
>RT94_RS02175
GTGCCTGAGCCATGTGCAGTCGCTGCTGAGCCGGTCGACGAGCCTCTGGTCTGCAAGCCTTGGTTCGTCTATCTGGTGCGCGCCGCCAATGGTTCTTTGT ACTGCGGCATCAGCGATGACCCTGTTCGACGCTTTGCCGCTCACCAGAGCGGCAAGGGTGCGCGCTTTTTCTGTTCAAGCCCGGCCGTGGCGCTGGTGTA CGTCGAACAGCACGTCAGCAAGGGCGAAGCCCTGCGTCATGAGCGGTTGATCAAGAAGCTGCGCAAGACGGCCAAGGAGGTGCTGGCTGCCAGCTACAAG GGCGTGCCGGTTCAGGTATCGATCAATGAGCGTGATGTCGTGTCATCCACCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCGGTAGGCTGTCAGGGAGGTGCGGGTTAAGCTGTCTGCTTTCCACGCGCCCTGAGGCTGAACATGTCCGAGTTGATTCTCCACCATTACCCCACCTCG TTGTTTGCCGAAAAAGCCCGTCTGATGCTGGGTTTCAAGGGGCTTTCCTGGCGCTCTGTGACCATTCCATCGATCATGCCCAAACCTGACCTGACTGCGC TGACCGGCGGTTATCGCAGGACACCGGTCTTGCAGGTCGGTGCGGATATCTATTGCGATACAGCCCTGATGGCGCGCCGTCTGGAACAGGAGAAGGCCTC GCCGACGTTCTACCCGGAAGGTCAGGAATTTACCGTCGCCAGCCTGGCTGCCTGGGGCGATTCGGTGCTGTTCATGCACGCGGTCAGTCTGGTGTTCCAG CCAGAATCGCTGGCCGTGCGTTTTGCCAAGGTCCCGCCCGAGGCCGCCAAGGCGTTCGTTGCAGATCGCTCATCGCTGTTCACCGGCGGCAGTGCAACGC
Amino Acid Sequence
>nuclease
MPEPCAVAAEPVDEPLVCKPWFVYLVRAANGSLYCGISDDPVRRFAAHQSGKGARFFCSSPAVALVYVEQHVSKGEALRHERLIKKLRKTAKEVLAASYK GVPVQVSINERDVVSST
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site