Pseudomonas viridiflava LMCA8, RT94_RS02175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd10456 | GIY-YIG_UPF0213 | - | - | 21 | 87 | 9.4509E-31 |
| PANTHER | PTHR34477 | UPF0213 PROTEIN YHBQ | - | - | 20 | 98 | 2.1E-22 |
| Gene3D | G3DSA:3.40.1440.10 | - | IPR035901 | GIY-YIG endonuclease superfamily | 18 | 111 | 4.9E-20 |
| SMART | SM00465 | uri_9 | IPR000305 | GIY-YIG endonuclease | 19 | 98 | 2.4E-5 |
| SUPERFAMILY | SSF82771 | GIY-YIG endonuclease | IPR035901 | GIY-YIG endonuclease superfamily | 20 | 90 | 1.83E-10 |
| Pfam | PF01541 | GIY-YIG catalytic domain | IPR000305 | GIY-YIG endonuclease | 21 | 90 | 6.5E-10 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.