Pseudomonas viridiflava LMCA8, RT94_RS18745
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0007165 | signal transduction |
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Biological Process | GO:0016310 | phosphorylation |
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0000155 | phosphorelay sensor kinase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0000160 | phosphorelay signal transduction system |
Inferred from Sequence Model
Term mapped from: InterPro:SM00073
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0004673 | protein histidine kinase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006935 | chemotaxis |
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0005737 | cytoplasm |
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 1874 | 1992 | 2.4E-40 |
| CDD | cd17546 | REC_hyHK_CKI1_RcsC-like | - | - | 1874 | 1985 | 8.83439E-32 |
| Pfam | PF01627 | Hpt domain | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 10 | 99 | 2.9E-8 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | IPR036641 | HPT domain superfamily | 917 | 1037 | 4.53E-15 |
| SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 1871 | 1989 | 1.42E-36 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | IPR036641 | HPT domain superfamily | 432 | 557 | 1.06E-13 |
| SMART | SM00073 | hpt_2 | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 1229 | 1326 | 3.2E-11 |
| SMART | SM00260 | chew_2 | IPR002545 | CheW-like domain | 1701 | 1844 | 8.2E-21 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | IPR036641 | HPT domain superfamily | 627 | 756 | 1.96E-24 |
| SMART | SM00387 | HKATPase_4 | IPR003594 | Histidine kinase/HSP90-like ATPase | 1568 | 1709 | 5.6E-21 |
| Pfam | PF01584 | CheW-like domain | IPR002545 | CheW-like domain | 1714 | 1845 | 1.9E-23 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | IPR036641 | HPT domain superfamily | 1229 | 1351 | 4.97E-25 |
| Gene3D | G3DSA:1.20.120.160 | HPT domain | IPR036641 | HPT domain superfamily | 917 | 1045 | 2.2E-13 |
| PANTHER | PTHR43395 | SENSOR HISTIDINE KINASE CHEA | - | - | 624 | 761 | 0.0 |
| CDD | cd00088 | HPT | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 1229 | 1327 | 7.81877E-13 |
| PRINTS | PR00344 | Bacterial sensor protein C-terminal signature | IPR004358 | Signal transduction histidine kinase-related protein, C-terminal | 1693 | 1706 | 4.0E-11 |
| Gene3D | G3DSA:3.30.565.10 | - | IPR036890 | Histidine kinase/HSP90-like ATPase superfamily | 1522 | 1707 | 2.4E-51 |
| Coils | Coil | Coil | - | - | 1415 | 1442 | - |
| FunFam | G3DSA:3.30.565.10:FF:000016 | Chemotaxis protein CheA, putative | - | - | 1524 | 1708 | 3.3E-60 |
| CDD | cd00088 | HPT | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 627 | 721 | 3.69417E-9 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | IPR036641 | HPT domain superfamily | 7 | 130 | 1.44E-19 |
| SMART | SM00073 | hpt_2 | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 775 | 878 | 0.026 |
| Pfam | PF00072 | Response regulator receiver domain | IPR001789 | Signal transduction response regulator, receiver domain | 1874 | 1985 | 3.4E-28 |
| Pfam | PF01627 | Hpt domain | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 629 | 722 | 5.9E-13 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | IPR036890 | Histidine kinase/HSP90-like ATPase superfamily | 1525 | 1706 | 6.81E-36 |
| SUPERFAMILY | SSF50341 | CheW-like | IPR036061 | CheW-like domain superfamily | 1709 | 1840 | 6.67E-25 |
| SMART | SM01231 | H_kinase_dim_2 | IPR004105 | Histidine kinase CheA-like, homodimeric domain | 1384 | 1523 | 7.4E-10 |
| Gene3D | G3DSA:1.20.120.160 | HPT domain | IPR036641 | HPT domain superfamily | 1228 | 1358 | 1.9E-29 |
| SMART | SM00448 | REC_2 | IPR001789 | Signal transduction response regulator, receiver domain | 1872 | 1985 | 6.0E-36 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | IPR036641 | HPT domain superfamily | 774 | 897 | 2.62E-20 |
| Gene3D | G3DSA:1.20.120.160 | HPT domain | IPR036641 | HPT domain superfamily | 626 | 760 | 7.1E-24 |
| Pfam | PF01627 | Hpt domain | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 1231 | 1331 | 1.9E-13 |
| PRINTS | PR00344 | Bacterial sensor protein C-terminal signature | IPR004358 | Signal transduction histidine kinase-related protein, C-terminal | 1669 | 1687 | 4.0E-11 |
| Gene3D | G3DSA:1.20.120.160 | HPT domain | IPR036641 | HPT domain superfamily | 1086 | 1214 | 1.6E-27 |
| SMART | SM00073 | hpt_2 | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 1086 | 1183 | 1.9E-9 |
| Gene3D | G3DSA:1.20.120.160 | HPT domain | IPR036641 | HPT domain superfamily | 771 | 902 | 1.7E-17 |
| Pfam | PF01627 | Hpt domain | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 1088 | 1186 | 1.7E-14 |
| Gene3D | G3DSA:1.20.120.160 | HPT domain | IPR036641 | HPT domain superfamily | 14 | 129 | 1.7E-9 |
| Pfam | PF01627 | Hpt domain | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 777 | 876 | 3.7E-11 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | IPR003594 | Histidine kinase/HSP90-like ATPase | 1572 | 1707 | 1.2E-13 |
| CDD | cd00088 | HPT | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 775 | 864 | 6.75495E-7 |
| PRINTS | PR00344 | Bacterial sensor protein C-terminal signature | IPR004358 | Signal transduction histidine kinase-related protein, C-terminal | 1613 | 1627 | 4.0E-11 |
| CDD | cd00088 | HPT | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 1086 | 1184 | 3.54506E-15 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | - | - | 1780 | 1842 | 3.3E-20 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | IPR036641 | HPT domain superfamily | 1086 | 1208 | 2.36E-27 |
| SMART | SM00073 | hpt_2 | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 627 | 728 | 1.2E-4 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.