Pseudomonas taetrolens DSM 21104, TU78_RS02245
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0015343 | siderophore transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0038023 | signaling receptor activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0009279 | cell outer membrane |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0015891 | siderophore transport |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF07715 | TonB-dependent Receptor Plug Domain | IPR012910 | TonB-dependent receptor, plug domain | 79 | 177 | 4.1E-20 |
| NCBIfam | TIGR01783 | JCVI: TonB-dependent siderophore receptor | IPR010105 | TonB-dependent siderophore receptor | 80 | 766 | 9.4E-91 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 544 | 569 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 56 | 77 | - |
| Gene3D | G3DSA:2.170.130.10 | - | IPR037066 | TonB-dependent receptor, plug domain superfamily | 60 | 188 | 8.8E-36 |
| Pfam | PF00593 | TonB dependent receptor | IPR000531 | TonB-dependent receptor-like, beta-barrel | 271 | 764 | 1.6E-60 |
| SUPERFAMILY | SSF56935 | Porins | - | - | 46 | 766 | 0.0 |
| CDD | cd01347 | ligand_gated_channel | - | - | 84 | 766 | 7.68319E-83 |
| PANTHER | PTHR32552 | FERRICHROME IRON RECEPTOR-RELATED | IPR039426 | TonB-dependent receptor-like | 30 | 766 | 0.0 |
| FunFam | G3DSA:2.170.130.10:FF:000001 | Catecholate siderophore TonB-dependent receptor | - | - | 61 | 187 | 5.5E-40 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 56 | 72 | - |
| Gene3D | G3DSA:2.40.170.20 | - | IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | 192 | 766 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.