Pseudomonas syringae pv. syringae B301D, PSYRB_RS11515
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B301D, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGAAACGGTTGTTGCCGTATCTGGGGCTCTTGAGCCTGCGCGCTCATTCGGCCGCCTTGATCGAGTCGGTGCTTCGTTATTACTTCAAGCACGCTCAGCT GTTTATCGAGCAGTGCGTTGAGCGAACCGTCGATATTCGCAGCTCTCAGCTTAATTGCCTTGGAGTGGCCAATCATCAGTTAGGACGCACTGTTGTTCTG GGTAATCGGGTCCCTGATCGGAGTGGCAAGTTTCGCGTCCACGTGAAAGAACTCGATTGGGAGCGGTTCCACGAATTTTTACCCATCGGCCCCGGCTACC GTCCGTTGGGCGCTCTTGTCCGATTCACGTTACGCGATCCTTTGGACTACGACGTTTGTCTTGAGCTGCGCCATGAAGACATCAGAGAACTGCGCATTGG CCAATCGAACACCTGTCACCTGGGCTGGACCACCTGGCTCGGGCGCGAGCATGCCCTGGGTCTGGTCATGCTCAACAGACCGATACATTAAGGACGACTC
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| DNA Sequence for Gene |
>PSYRB_RS11515
ATGATCGATGTAGATTTGCAGCAACTCGTCAATGCCCTCGATGCGCCTACACGCGGAGAACTGGAGGGAACGGCCGAACGCTGCGTTGCGAGAGGCAGCA GCAAAATTCTGGTTGAAGACCTGTTGCTTGCCCTGTTGGAAAGACCTGATGGGATGCTTGCCCGTGCGCTACTGGACGCCGAGGTTGGGGCTGACGAACT TGCAGGGTTTCTTCACCCGCCAGTCGAGCAAAGTGCTACCCGGAGCCCGGCATTTTCTGCCGAACTTGTTCAATGGCTTCAGGACGCGCTGTTGATTGCC AATCTGGATCTGGGCCAAAGCCTGATTGATCAGTCTGCGTTGATTCTTGCCTTGCTGCGTAATCCCTTGCGCTATGCCGACCGTCCATACCAGCCATTAT TGGCGAAGATTAATATCGAGCGCTTTCGCGATCATGCCCTTGCCGAACAGATGCCGGAGGTAACAAAACCGTCAGTGAATCAATGTGATTCGCTGCTCGA ACGCTTCACTCATAATCTGACGCAGCAGGCCAGGGAGGGGTTGCTCGATCCTGTGCTGTGCCGTGATGACTGTCTGCGTCAGATGATCGATATCCTGTCT CGTCGACGCAAGAACAACCCCATTGTGGTGGGCGAGGCGGGTGTCGGCAAGACTGCGGTTGTCGAAGGGCTGGCGCTTAAAATCGTTCACGGGGAAGTCC CCGATCTATTGGAAAACGTTGAATTACTGTCTCTGGATATGGGGCTGCTCCAGGCGGGTGCCAGTATCAAGGGCGAGTTCGAGCGTCGTTTGAAGGGCGT GATTGACGAGGTCAAATCCTCATCCAGTCCGGTTATTCTTTTCATCGATGAAGCTCACACACTCATCGGCGCCGGTGCGCAGGCGGGTGGTTCGGATGCG GCCAATCTGTTGAAGCCGGCATTGGCACGCGGCGAGTTACGGACCATTGCAGCGACGACGTGGGCCGAGTACAGACAATATTTTGAAAAGGATCCGGCGC TTGCACGTCGCTTTCAACCGGTCCGGGTGCTGGAGCCGACAGTAGAGCAGGCCATCACCATTCTGCGCGGGCTTGCTCCGCTATATGAACGTACTCATGG TGTCTATCTGCGCGATGATGCTGTAGTCGCCGCAGCCCGGCTTTCGGCACGCTATCTCACCGGGCGCCAATTGCCGGACAAGGCAATCGATCTGCTTGAT ACAGCTTGCGCTCGAGCACGAATCGCTCTGGTCGCCGTGCCGGAGCGTCTTGAATATCTACGAAGCGAGATGGCGCGTCAGCAGAGGCATTTCGAAGCAG CACGGCGTGATGCCAATGCCGGTCTGTCGGTTGATGACAAGGCATTGGATACGCTGGCTGCCGATCTGTCACGGCTGCGGAGCGAGGCTGTAGTGCTGGA GTGTACGTGGGCTGATCAACGGAAAGCCGTCGAGCGTCTGCTGGACCTGCGCAAGCGACTGGCTGACCGAACAGCACAGTCGGCTGAGGCGAATGAGTGT GAGTCCATACGCGCGCTTGCGTCCGAGTTGGCCCAGGTTCGACAGACCCTGATCGATATTCAGATGAACGAGCGTCTCGTGAGCTTTGAGGTATGCCCCA GGCTGATAGCTGAAGTAGTGGGTGGTTGGACTGGAATTCCTGTATCGCGTCTGGCTCAGGAGCACAGCCCGGCAATCAACAGCTTTTCCTCAGAACTGCG TATGCGCATCCGGGGTCAGGAGCCGGCGATGCTGACCATTGAAAAGGCAGTCCGGGCATCGGCTGCGGGTTTGAATGCACCCGGTGCCCCAACAGGGGTA TTTCTTCTGGTCGGACCCAGCGGAGTGGGCAAGACGGAAACAGCCATTGTTCTGGCTGATCTGTTGTATGGCGGCGAACGTTTTCTCACGACGATCAACA TGTCCGAATTTCAGGAGAAGCATACCGTTTCCCGATTGATCGGCGCCCCTCCGGGCTATGTCGGTTATGGCGAAGGGGGGATGTTGACCGATGCCGTTCG ATGCAAACCGTATTCAGTCATTCTGCTCGATGAGGTGGAGAAGGCTGATCCGGATGTACTGAATCTGTTCTACCAGATTTTCGATAAAGGCACGGCCAAC GACGGAGAGGGCCGGGAAATCGATTTCCGCAACACTCTCATTCTGATGACCTCCAACCTGGGTGCCGATCTGATCCATGCAAGCTGCCAAGAGGGCAGAC GACCTGATGTCACGGAGCTGAAAAACAGGCTGAAACCGATACTGAGTGCGCATTTCAAACCGGCATTGCTGGCTAGAATGCGGGTTGTGCCTTATTACCC GATCATGGGGTCGGCGCTGCGTGAACTGGTCGAGTTAAAGTTGGCTCGTCTTGGCGAGAGGCTTCAATCCCGTGGCCTGACCTTCAGCTATTCGCATGAT CTGGTTTGCTATCTGCTTGAGCAGTGTGCGCAAGACGACAGCGGCGCCCGGCTGATCGATCAGTTACTGGAGTCCAGTCTGACCCCCTTGATAGCAGACC ATTTACTTGGCGCCATGAGCCGTGGTGACAAAGTCGTCAGGGTTCACGCAACACTGGACAGTTCAGGTGGTGTTGTCTGTGAGTTCGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTGGTCTCGTCCTTTCATTCGCTACACGACTCATTAGGCTATGCGCAAACATTGGTTTCGCGATACTCGGCGCTCTCCCGATCAGCCGATAGCCAGTCG TTGCAGCATGATTTTGTACTATCTGCTGCCGAGCTCAGTAGCTGCCAGGCAAGCCAGTTGTTTTTGCTCGACGCGAGCCACAAACGCCTCTGCCTTGCTG CGCAGACCGTCGATAGCATCATTCAGCCTGATCAGAAAACGATTTCACTTAAAGACTACTACGACGAGCCTTTACTGCAGTTCTGTCTGCTTCAGAACCG GGTTGTCAGCGTGCCGAAAATCAGCAGCAGTCTTTACGGAACCCGCTTTCTACCGGTAGAGGCGCAAGAGTGGAAATCACTGCTGTGCGTTCCGCTGCAC AATCGTGAGCGGACAACTGTCGGGGTGCTGGTATGTGTGAGCAGGCATTCTGGAGAGTTGGAAGGCTACGCAGAATCTCTGGGCGCGCTAGGGTCGTTCG
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| Amino Acid Sequence |
>ATPase AAA
MIDVDLQQLVNALDAPTRGELEGTAERCVARGSSKILVEDLLLALLERPDGMLARALLDAEVGADELAGFLHPPVEQSATRSPAFSAELVQWLQDALLIA NLDLGQSLIDQSALILALLRNPLRYADRPYQPLLAKINIERFRDHALAEQMPEVTKPSVNQCDSLLERFTHNLTQQAREGLLDPVLCRDDCLRQMIDILS RRRKNNPIVVGEAGVGKTAVVEGLALKIVHGEVPDLLENVELLSLDMGLLQAGASIKGEFERRLKGVIDEVKSSSSPVILFIDEAHTLIGAGAQAGGSDA ANLLKPALARGELRTIAATTWAEYRQYFEKDPALARRFQPVRVLEPTVEQAITILRGLAPLYERTHGVYLRDDAVVAAARLSARYLTGRQLPDKAIDLLD TACARARIALVAVPERLEYLRSEMARQQRHFEAARRDANAGLSVDDKALDTLAADLSRLRSEAVVLECTWADQRKAVERLLDLRKRLADRTAQSAEANEC ESIRALASELAQVRQTLIDIQMNERLVSFEVCPRLIAEVVGGWTGIPVSRLAQEHSPAINSFSSELRMRIRGQEPAMLTIEKAVRASAAGLNAPGAPTGV FLLVGPSGVGKTETAIVLADLLYGGERFLTTINMSEFQEKHTVSRLIGAPPGYVGYGEGGMLTDAVRCKPYSVILLDEVEKADPDVLNLFYQIFDKGTAN DGEGREIDFRNTLILMTSNLGADLIHASCQEGRRPDVTELKNRLKPILSAHFKPALLARMRVVPYYPIMGSALRELVELKLARLGERLQSRGLTFSYSHD LVCYLLEQCAQDDSGARLIDQLLESSLTPLIADHLLGAMSRGDKVVRVHATLDSSGGVVCEFE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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