Pseudomonas syringae pv. syringae B301D, PSYRB_RS11515

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00004
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00004
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR03345 JCVI: type VI secretion system ATPase TssH IPR017729 AAA+ ATPase ClpV1 14 850 0.0
FunFam G3DSA:3.40.50.300:FF:000025 ATP-dependent Clp protease subunit - - 550 766 4.3E-78
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 165 502 3.97E-69
FunFam G3DSA:3.40.50.300:FF:000010 Chaperone clpB 1, putative - - 154 347 8.4E-85
Pfam PF10431 C-terminal, D2-small domain, of ClpB protein IPR019489 Clp ATPase, C-terminal 772 846 5.4E-10
PANTHER PTHR11638 ATP-DEPENDENT CLP PROTEASE - - 29 855 0.0
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 597 738 7.6E-7
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 157 347 9.2E-70
Pfam PF02861 Clp amino terminal domain, pathogenicity island component IPR004176 Clp, repeat (R) domain 26 67 3.5E-4
Pfam PF00004 ATPase family associated with various cellular activities (AAA) IPR003959 ATPase, AAA-type, core 208 339 4.5E-10
Gene3D G3DSA:1.10.1780.10 - IPR036628 Clp, N-terminal domain superfamily 5 156 2.7E-19
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 675 693 3.5E-33
SMART SM01086 ClpB_D2_small_2 IPR019489 Clp ATPase, C-terminal 768 860 2.5E-5
CDD cd19499 RecA-like_ClpB_Hsp104-like - - 565 766 2.22763E-80
Pfam PF07724 AAA domain (Cdc48 subfamily) IPR003959 ATPase, AAA-type, core 597 762 2.6E-41
Pfam PF17871 AAA lid domain IPR041546 ClpA/ClpB, AAA lid domain 347 439 1.4E-28
CDD cd00009 AAA - - 188 339 9.4609E-17
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 646 664 3.5E-33
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 601 619 3.5E-33
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 708 722 3.5E-33
Gene3D G3DSA:1.10.8.60 - - - 770 861 2.6E-9
SUPERFAMILY SSF81923 Double Clp-N motif IPR036628 Clp, N-terminal domain superfamily 20 122 1.06E-9
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 203 349 4.7E-9
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 550 766 4.1E-63
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 348 544 2.2E-44
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 546 834 4.99E-55

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.