Pseudomonas syringae pv. syringae 41a, PSS41A_RS14110

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1697 1710 1.8E-10
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 627 756 1.44E-23
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1088 1208 1.23E-27
MobiDBLite mobidb-lite consensus disorder prediction - - 1211 1231 -
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 627 725 1.1456E-8
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1784 1846 2.6E-20
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1576 1711 8.0E-14
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1231 1352 4.97E-25
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 780 869 1.15604E-7
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1875 1986 2.18485E-32
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 922 1050 1.5E-13
Gene3D G3DSA:3.40.50.2300 - - - 1875 1994 4.0E-41
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1872 1991 4.84E-37
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 129 5.5E-8
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1528 1712 2.4E-59
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1873 1986 1.5E-36
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 1.07E-19
Coils Coil Coil - - 1426 1446 -
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 782 880 2.9E-11
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1529 1710 3.41E-36
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1388 1527 7.6E-9
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1526 1712 3.9E-51
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1875 1986 6.6E-29
SMART SM00260 chew_2 IPR002545 CheW-like domain 1705 1848 6.3E-23
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 776 906 3.3E-16
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1230 1359 2.4E-27
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 780 883 0.026
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1617 1631 1.8E-10
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 99 4.6E-8
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 923 1043 1.59E-15
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1231 1328 4.3E-10
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 626 761 1.2E-22
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 432 557 3.59E-14
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1572 1713 8.5E-23
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1713 1844 4.58E-25
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1231 1329 1.60422E-11
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1088 1186 2.87864E-14
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 629 723 1.2E-12
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1233 1333 4.8E-14
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 780 903 4.97E-19
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1090 1181 3.2E-14
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 627 729 0.001
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1088 1185 1.4E-9
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1673 1691 1.8E-10
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1718 1848 7.8E-24
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1083 1212 3.5E-29
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 1117 1986 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.