Pseudomonas syringae pv. syringae 41a, PSS41A_RS07560
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae strain 41a 41A02, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATATGGGTGAGGGCGGCGCGCTGGTGGCGATTTCCTCGATTGCCGGCGGTGTGTATGGCTGGCAGGACCATTCCCATTACGCAGCGGCCAAGGCCGGCGT GCCAGGGCTGTGCCGGTCACTGGCGGTGGAACTCGCCCCGAAGGGCATCCGTTGCAACGCTGTGATTCCCGGCTTGATCGAAACACCGCAATCGCTGGAC AGCACGAACTCGCTGGGGCCGGAAGGTCTGGCGCAGGCGGCCAAAGCCATTCCGCTGGGCCGGGTCGGTCGAGCGGATGAAGTCGCTGCGCTGGTGCGTT TTCTGTGCAGCGATGAAGCCAGTTACCTGACCGGGCAAAGCATCGTGATCGACGGCGGCCTGACCGTGCGCTGGCCCGAGTAGATCGATTCGGATCGGCA GCGAGCCTGCTCGCGAAGCGTTCAGTACAGGCGTGTGCCAGTGCCTGAGCGTTCGCGAGCAATACGCCGTGATCCCCAAATCAACCAAGGAATCCGACCC
|
|
| DNA Sequence for Gene |
>PSS41A_RS07560
ATGCAGCAACTCAAACAAAAGCGGGCAGTGATCACCGGAGCAGGCAGTGGCATTGGCGCAGCCATCGCCCGTGCCTATGCAGCTGAAGGCGCGCGTCTGG TGTTGGGCGACCGAGACGCCGACAGCCTGGCGAAGATCGCTGCAGAGTGCCGCCAGCTGGGCGCGCAGGTTCAGGAATGCGTGGCCGATGTCGGCAGCGT CGACGGCGCGCAAGCCAGCGTCGATGCCTGTGTCGAGCAGTTCGGTGGCATCGACATTCTGGTCAACAACGCGGGCATGCTGACCCAGGCGCGTTGCGTC GACCTGACCCTCGACATGTGGAACGACATGCTGCGCATTGACCTGACCAGCGTGTTCGTGGCCAGTCAGCGGGCATTGCCGCACATGATTGCCCAGCGCT GGGGGCGCATCATCAATGTCGCGTCGCAACTGGGCATCAAGGGCGGTGCCGAACTGACCCATTACGCCGCCGCCAAGGCCGGGGTGATCGGTTTCAGCAA ATCCCTGGCGCTGGAAGTCGCCAAGGACAACGTGCTGGTCAACGCCATCGCGCCCGGTCCTATCGAAACCCCATTGGTCGCCGGGATCAGCAGCGCCTGG AAAACCGCCAAGGCTGCCGAGTTGCCACTGGGCCGCTTTGGTCTGGCCGAGGAGGTTGCCCCGGTGGCGGTGCTACTGGCCAGCGAGCCGGGTGGCAACC TGTTCGTCGGTCAGACACTGGGCCCCAATTCCGGCGACGTCATGCCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAAACAGCTGGAGAACGCCTGATGTGTGGATTGTGCGGGCTGTTGGGTGAAGACGTGCACTGGAGCGATCCGCTGGCTGCAGAACTGCCCAGGCGGCGT GAGCGCTTGCGGCGTATTGCTGCAATCAACAAGGTGGTCGCGCCGTTTCGTCTGAAGGTCGAAGATTTTCAAGGCGTGTCTTATCTCCTGCTCGGGGCCA CCGGCAAGCAGGAGCTGGCGACCGGGCTGGAGCAGCTCTGGCAGAAAGCCGAGTTGCTGATCGGCCGGCCGCTGGACCCGCTTGATTCAGGTCTGCTCGA TCATCTGCAGAGGTCATCATGAGTATTGCCCTGAACGTTATTACCGGCTTCCTCGGCAGCGGCAAGACCACGCTGCTCAAACGCCTGCTGGCCGATGAAA ACATGGGCGACACCGCGCTGCTGATCAACGAATTCGGCGACGTGGGTATCGATCATCTGCTGGTTGAAGAGGTCGCACCGGATACCGTGCTGCTGCCCAG
|
|
| Amino Acid Sequence |
>3-oxoacyl-ACP reductase
MQQLKQKRAVITGAGSGIGAAIARAYAAEGARLVLGDRDADSLAKIAAECRQLGAQVQECVADVGSVDGAQASVDACVEQFGGIDILVNNAGMLTQARCV DLTLDMWNDMLRIDLTSVFVASQRALPHMIAQRWGRIINVASQLGIKGGAELTHYAAAKAGVIGFSKSLALEVAKDNVLVNAIAPGPIETPLVAGISSAW KTAKAAELPLGRFGLAEEVAPVAVLLASEPGGNLFVGQTLGPNSGDVMP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|