Pseudomonas syringae pv. syringae 41a, PSS41A_RS07560
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 8 | 25 | 1.6E-44 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 209 | 229 | 1.6E-44 |
| FunFam | G3DSA:3.40.50.720:FF:000173 | 3-oxoacyl-[acyl-carrier protein] reductase | - | - | 2 | 248 | 1.3E-69 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 176 | 193 | 1.6E-44 |
| Gene3D | G3DSA:3.40.50.720 | - | - | - | 1 | 247 | 6.4E-74 |
| Pfam | PF00106 | short chain dehydrogenase | IPR002347 | Short-chain dehydrogenase/reductase SDR | 7 | 197 | 1.4E-57 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 155 | 174 | 1.6E-44 |
| PANTHER | PTHR42879 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE | - | - | 1 | 245 | 8.6E-67 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 129 | 145 | 1.6E-44 |
| CDD | cd05233 | SDR_c | - | - | 9 | 230 | 1.21439E-69 |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 82 | 93 | 3.3E-15 |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 135 | 143 | 3.3E-15 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | IPR036291 | NAD(P)-binding domain superfamily | 1 | 246 | 1.13E-74 |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 155 | 174 | 3.3E-15 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | IPR002347 | Short-chain dehydrogenase/reductase SDR | 82 | 93 | 1.6E-44 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.