Pseudomonas stutzeri NT0128, UF78_RS11345
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri strain NT0128 271_122909_17109197_201____176, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGGTTTTTGTTCAGCTACCGATTCCCAACGTGAACATCCTCGAAGTCGGCGAGTTGCACATGGCACTTGCCGATGCGGCCCAGGGAGACAAGCTGACCG CGGTTTGCCAGGGTTATATCGGCGGTGGAATCGCCGGTGAGGCATTGCTGATCTTTCATGACTCGGAAGTGGCCGACATGGCGCGCCTGATGCGCGCAAA GGACTTCCGTGAACTGGAAATGCTGCTCGATCTGTCCAGTCTCCTGATCAGTGCATGCCTCAGCGGCATCGCCGATCAAATTGACGTGGTGTTCTCCCAA GGGCATCCGCAGGTGCTGGGCCAGCACGCGTCGATCGACGAGCTCATCCGGCTCAATCGGCAGCGTTGGAAAAACACCCTTGCGGTGGAGATCAGCTACA GCCTGGAAGGCCATGATGTCCATTTCGATCTGTTGTTGCTGTTCACCGAAGACTCGGTTGAGCTGCTGTCTCGCAAACTCGCCTACCTGATGGCCTGAGC
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| DNA Sequence for Gene |
>UF78_RS11345
ATGTCCGACTCGATGAATCTGAGCGAACTTCATTGGCTTCTGGCGATCGTCCAGAGCATCGACGTTGGTGTTGTGGTCCTGGATCGCGAATACCGCATCG ATGTGTGGAATACCTTCATGGAAAACCGCTCCGGGCGGTTGCCTGAAGATGCGCGGGAAAAATCTTTTTTCGAGCTGTTTCCCGAAGTGGATGAGCAATG GTTTCGGCGCAAGGTGGAGAACGTTGCGACGCTCGGCACGCCGTCGTTCACCATCTGGGAGCAACGTCCCTATTTGTTACGGTTCAAGAATTACCAGCCG ATCACCGGGTTGGAAGATTTCATGTACCAGAACACCACTTTGATGCCCTTGAAAGGCCTCAGCGGCAACATTGACCAGATTTGCCTGATCATCTACGACG TGACCGACGTCGCCATCAACCGGCGCCAGCTACAGGCGGCCAACCAGGAGCTGCAGCGGTTATCGAGCACTGATCGCCTGACGGGTCTGTTCAACCGCGG CCATTGGGAAGAAATGCTGCGTCAGGACTATGCTCGGCACCGACGTTACGACCGTAATGCCGCACTGGTGATGTTCGATATAGATCACTTCAAGCGGATC AATGACAGCTACGGTCATCAGGCAGGCGATGCGGTCATTCAGCGGGCCGCCGAGCTCATCCGCCAAAGCATGCGAGACGCCGACATAGCTGGGCGCTACG GCGGTGAGGAGTTCGTGGTACTGCTGCCGGATACAGACAGCGAGGGGGCCGTGACCTTCGCGGAAAGGCTGCGGCAGTCCATCGAGGCGCATGAGGTCAT CCATGAAGGGCGCAGCATCCATTTTACCGTCAGCCTCGGCATCGCGGATCTCAGTCAGCCCACCAGCGGCTATGCGCAGCTGATCGAGCGAGCTGACAGC GCGATGTATATGTCGAAATCGGCAGGCCGCAATCAGGTATCGCTCTACCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCAATATTCAAAGACGTCAGGTGGGATTGCGCTCGGTCAGGAAATTCAACAAGGTGGCTTCCTCGCTGCTCAGCCACTTGCGCTTTCTTGCCTTGGACAA CCGGGCGAGCTCGCCTGAGGTGAAGGCCTGGAGTACGTCGGGGTGGATATAGCACTGGCGGCAGATGGCCGGGGTGTTGCCAAGCTGGCGGGACACCTGG GCGACCGTCTCGACCAGATTGCGCCGGGCAACGGCGTCCGGTTGCCAGTCGCGCTTGCGCAGGTAGTCCAGGGCCAGCGCACTACCGGCCCAGGTGCGGT AGTCCTTGGCAGTGAAGTCACCACCAGTCATATCTTGAATGAACTGATTCACGTCGCTGGAGCTCACCGGGTGGCGTAAACCGTCCTCGTCCAGGTACTG GAAAAGGTGTTGCCCGGGCAATTCCATGCAGCGACGCAGGATGCGCGCCAGTCGTTGATTTTTCAGCGTGACCTGATGCTTTACACCGCTCTTGCCTCGA
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| Amino Acid Sequence |
>diguanylate cyclase
MSDSMNLSELHWLLAIVQSIDVGVVVLDREYRIDVWNTFMENRSGRLPEDAREKSFFELFPEVDEQWFRRKVENVATLGTPSFTIWEQRPYLLRFKNYQP ITGLEDFMYQNTTLMPLKGLSGNIDQICLIIYDVTDVAINRRQLQAANQELQRLSSTDRLTGLFNRGHWEEMLRQDYARHRRYDRNAALVMFDIDHFKRI NDSYGHQAGDAVIQRAAELIRQSMRDADIAGRYGGEEFVVLLPDTDSEGAVTFAERLRQSIEAHEVIHEGRSIHFTVSLGIADLSQPTSGYAQLIERADS AMYMSKSAGRNQVSLYR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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