Strain | Pseudomonas stutzeri strain 19SMN4, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGCGCTACGATAATCGGAGTCTGGCAGGTCATGGCACGTCCTCGGAAAAGTCGGCGCGCATTGTCGCAGAAAACACCGGGCGCGACGAAAGCTGCAGATC GCGGTCAAAATCTCATGGGGTTTGACCTAGAGCGGTGACCCCAAAGCCGCACCGACGTAAAGTGCGCGGGGGGTCGCCACCCGAGCGGCCCCATTCACCA CCCGCCTGGAGGAATAGCATGCCCTGGTATTTCTGGCTGATTCTGGTCGTCGCATTAGGGTCGATCGTCGGCAGTCTGTTGATGTTGCGCTCCACTGCCC GGAAAATTCCGCTGACCGACGAGCAGAAGAAGCGAATTGCCCAGCGCAATGCCGAGGCCGACGCGCAGGAGTCGCGCGATCGCTGACCGCCGACGAATGC CGGACCGCGATACCGGCTGACGTTTACAGATGCCCGCTGCGCTCAATAATGGCACTATGCCCGTTTGCCGCGTACATGCAGTTCTGGCAGGACTCCTTTA
|
|
DNA Sequence for Gene |
>UIB01_RS07920
ATGCAATCTCCCTACTCCATTGACGGCCCGGCCAAACCGAAGGCTAAGGCGATCTTTGCCCGTCGCATTCTCCCCGGCATGGTCGCGCTGCTGGTGGCGG CGATTGTTGCCGCCGCTTTTGCCATCGCTCATATCGCCCGCAAGATCGACCAGGACGCCCTGCAGCAGAGCCATTTCCTTGCCAGCAAGGCATTACAGGC ACAGCACGACTGGATGAATCGCTCCATCGTCGATTACGCCTTCTGGGGCGACGCCTATTTGCATCTGAGCAAGCAGGTCGACGCGAACTGGGCTTACGCC CAAGCCAATCTTGGGCCCTCGCTGTACAAGGATTTCGGCTATGAGGCGATACTGGTAATCACCCCGTCGGGCGACACCTCGTACGCCGTGATTCACGGCG AGCTGCAGGCGGTGGATGCTTTCCAGTATTTGCAGCACGGCCTATCTGAGCTACTTGCTCGGGCCCGTGAGGCAGCAGAAGACGATGCCGGAGCCTCGGC CTTACTCTGGCTACACGGGCAACCTGCATTGGTCGCGGCTGCATCGCTGGCCACGGGTGGCGCCGACATCGAAGAGCACGAAGGGCCGCCATCCACGCTC GTCTTCGTCGACGTACTCGACGCCGAACGGCTTGAGGCGATCGGCGAGCAGTACGCTGTGGAGAAACTGAAGTTGCTTACCGATCCAGCGGATCATGCCG GGCCGGCGATTAGCCAAACCCTGGAGGATGGGACTGCGGTCTACTTCACCTGGACAGCCGCGCAGCCGGGCCGCCTGCTGCTACTGGTCACGCTGCCCGT TCTCGCCGCCGTGGCGCTGGGTCTTGGGCTGCTCGCCTGGCTGCTAGTGCGCCATGCGCTACGCGCGATGCACCTGCTCGATCTGAGCTACGCACGCCTC GCCTCCAGCCGCAGTGCATTGGCCGAGAGCGAGGAGCGTTTTCGCGATGTAGCCGAAGCGGCCTCCGACTGGATCTGGGAGACCGACGAGCAGGCCCGCC TGACCTTCCTCTCCAACCGCTTTCGGCAGATCACCGGCTACGAACCGAAGCAGTGGCTGGGCCGCCCCTTGCTGGAGCTGCTGATCACCGACAGCGCGGC ACTGCGGAGCTGGCTCGAAGCGCCGGAGATCACGCCATTGCGCAGCAGTTACCGAGCAGCCGATGGCTGCGAGCGCTTCTGTCGCCTGGCCGCGCGCAGC ATCCGGCACGACGGCGCACTGGTCGGCTACCGCGGAACGGCCAGCGACGTCACCGAGGAAACCAAGGCGCAGGCACGCGTCCAGTATCTTTCCCAGCACG ATCCGTTGACCGGACTGCCCAACCGCAGCCGGTTGCGCGACTACCTCGAGCAGAACCTGGCGTCGCTGCGTAGCGGCTCGACCCTGACTCTGCTCTATAT CGACCTCGATCGCTTCAAACCGGTCAACGACACCCTGGGACATGCGGCAGGTGATGAGGTCCTGATGGGCGTAGCGTCTCGCCTGCGCGAGCGCACCCGG GATGGCGACCTGGTGGCACGTCTCGGTGGCGACGAGTTCGTCGTCGCGCTGCACCGCATGAGCGAGGACGGCGGCATTGATCGCCTGTGCAATCGCATCA TCGAGGCGCTCAGCGCACCCTTCATCTACGAAGACCAGCAAATCAGCATCGGTGCGAGCATCGGCGTTGCCCTGGCGCCTGACGATGCCTCCCAGGCCAA CGAACTGCTACGTTGCGCCGACATCGCGCTCTATCAAGCCAAGGACGCCGGGCGAGGCACCTGGCGGGCGTACGGCAGGGAGATGGACCAGCGCCTGCAT GAACGACTCAGGCGTGAAGAGGAGCTGCGCGTTGCGATAGCCGAGCAGCAACTGGAAGTCCATTACCAGCCACGCTACTTGAGCCAGAGCATGCAGATCA TTGGCGCCGAGGCCCTGGTGCGCTGGCACCACCCCACGCAGGGCATGCTGCTCCCCGAACAGTTCATCCCTCTGGCCGAAGAGGCCGGATTGATCATCCC GCTCGGACGTTGGGTGTTGCACCAGGCCTGCCAGCAAGCCGCCAGCTGGCCGGTCGAAATGACCGTGTCGGTCAACCTCTCGCCGCTGCAACTGCACGAT GATCGTCTGCTCGACGAAATAGCCCGCGCGCTTCGCGAGAACGGTCTGCCGGGAGAGCGTTTGGAGCTGGAGGTCACTGAAAGCGCGCTGCTCCAGGAGA CGCAAAGCACGCTGGACGCACTCAAGCGCATCAAGGCGCTCGGCGTTCACCTGGCGGTAGATGACTTCGGCACCGGCTATTCGTCGCTGACCAACCTGCG TCATTACCCGTTCGACGTCATAAAAATTGACAACAGCTTCGTGGCTGGCATCGAGCAATCGACGGAAGACCACTCAATCGTGCGCGCGCTGATCGAGCTG GGCCGCGGGCTGCAGATGCGAGTAACCGCCGAAGGGGTAGAAACCGAGGAGCAACTACGCCTGTTGACAGATGATGGCTGTACTGAGGTACAGGGATTCC ACATGAGCCTGCCAATGCCAGCCGAGGAACTGCGGCGGCTGCTCGCACGCCCGACTGATATCAGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGCCAGAATTGCAGGCGCGCTCCAATCAGCGCTTGAACTCGAATCGGATTTCGGCGCCGTCGATCAGTGCCTCGTCTTCATCCTCACCGGAGATCAGACG ACCGCCGATCTGCATCGACTGAGACGCCTTGCCTTTTTCAAAAAGTGGCGGCAGCAACCGTGCAGCCTCGGCGCTGGGCGCGGGCATCAGCTCCTCGGCG AGCTCCTCCGGCAAGTGCAGATCAAGTTCGGCCTCGGGAAGGTCAACGTCCTCCGGCTTCGCTGGCGCAGGGCGTTTGGCTGGTGCAGCCCGCGGTACGG GTTCCGGTTCGGGAATACTGATCTGCACGTCTGGCGAAGCCGAGTCTTCGGACTCTTCGGGTGCAGCCAGTTCAATCTGCAGATCTGGCGGCTCCTCCGC TGGCTCAGAGGCAACCGGGGCCTGCTCTGGTTGCTCGACCGGCCTCGGCACATCCTCAGGCTCGGGCCTCGGATCATCACCACAGCCACTCAGCAAGGCC
|
|
Amino Acid Sequence |
>histidine kinase
MQSPYSIDGPAKPKAKAIFARRILPGMVALLVAAIVAAAFAIAHIARKIDQDALQQSHFLASKALQAQHDWMNRSIVDYAFWGDAYLHLSKQVDANWAYA QANLGPSLYKDFGYEAILVITPSGDTSYAVIHGELQAVDAFQYLQHGLSELLARAREAAEDDAGASALLWLHGQPALVAAASLATGGADIEEHEGPPSTL VFVDVLDAERLEAIGEQYAVEKLKLLTDPADHAGPAISQTLEDGTAVYFTWTAAQPGRLLLLVTLPVLAAVALGLGLLAWLLVRHALRAMHLLDLSYARL ASSRSALAESEERFRDVAEAASDWIWETDEQARLTFLSNRFRQITGYEPKQWLGRPLLELLITDSAALRSWLEAPEITPLRSSYRAADGCERFCRLAARS IRHDGALVGYRGTASDVTEETKAQARVQYLSQHDPLTGLPNRSRLRDYLEQNLASLRSGSTLTLLYIDLDRFKPVNDTLGHAAGDEVLMGVASRLRERTR DGDLVARLGGDEFVVALHRMSEDGGIDRLCNRIIEALSAPFIYEDQQISIGASIGVALAPDDASQANELLRCADIALYQAKDAGRGTWRAYGREMDQRLH ERLRREEELRVAIAEQQLEVHYQPRYLSQSMQIIGAEALVRWHHPTQGMLLPEQFIPLAEEAGLIIPLGRWVLHQACQQAASWPVEMTVSVNLSPLQLHD DRLLDEIARALRENGLPGERLELEVTESALLQETQSTLDALKRIKALGVHLAVDDFGTGYSSLTNLRHYPFDVIKIDNSFVAGIEQSTEDHSIVRALIEL GRGLQMRVTAEGVETEEQLRLLTDDGCTEVQGFHMSLPMPAEELRRLLARPTDIS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|