Pseudomonas sp. StFLB209, PSCI_RS05280

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. StFLB209 DNA, complete genome. [Details]
DNA Sequence Upstream of Gene
AGCCATAAAGAAGCAATTATTCAGATTCAGAGCAGCAAAATTGCGCGGGCCGCGCGACGCGGTCGGAACACCGGGCAGGCTGCATTGCGTACGACAAACA AGCGCCACTCAACTGCGCTCAGGGTCGGCAAGCTTAACCCAAGTCGGCGGACGCTGGCAGGGGGGCTGCCCGGCGACAGCCCGAAATCCGCCGTTACGCC GCAGGCAGATACCGCCCTGGCGATATGACTAAAAAAGGTGCAGAAAACCCCTTGAACAATGCCAGATCCGGCTTAATTCTTTGCCGGTCCTTGCCGAGTA ACAGTTACGCGCCTTGAATTGATCAAATGCGAAGTGAAATACGGCAAATACAACCAACCGAACGGGCCGACAAACAGGCGTGACCACCAATAAACGCTGG CACTTAGCCACAACTAAAGGCATGCTAGCCGCCATTTGGGCGCCCGGCTTATAGTGCAGGCTGCATTCGCTGCTTCAGTCCAGTAGTCAGGAACATCGAC
DNA Sequence for Gene
>PSCI_RS05280
TTGCCCACACCAACGGCTTCTACATCATCGCGTAGCGTCAAGAATTCCAGTCAACTGCCTGTGCGTGGTTCACTGAAAGGCGCGTTGGCCGCTCTGGTGT TGGTGATGCTCGCCCTGTTGCTGTGGCAATCCTTCGAGCAGTTTCAACAGACTCAAGAGCGTCAGCGCCAGCGCAGCCTGGACTACAGCATGCAGCTGGC AGACCGCCTGAGCCTGAACCTGACACTCAGCGCCCAGGTCAGCGTGAGCCTGCTGGATGAGGCGGTCAGCGTCGGTCAGTCGCTGGAGCAGCCCTCGACC CTGGACAACCTGCGCCAGGCGCTGCCGGCCCTGCAAAGCGTGGCCTGGCTCAGCCCAGCCGGCGATATCATCAAAGACAGTGCAATGGGCGCCGGTGACG CAGCCTTTCTCAAAGAGCAACTGCGCAAAGCCCAAGGCAAGCCGTACTACTACACCAACGCCAGCGACGGCCGGCTGGTTTACCTGTTGGTCCGTCAGGC GGGCGGCATTACCGGTGACTACTGGGCATTGCGTCTGGGCCGGGAGGCACTCAAGCCGCTGACCCAGCAACCGTCCCACGACTTCATGCACCTGTGGCGC CTGGAAAATCGTGACCAGTCGCAGATTATCGCCCGTGACGGGCATCGCAGTAATGGCAACCTGCAAACGGTGCTGCTGCAACCGATCAGCAACAGCGACT GGCAACTGCATGGTTTGTTCGATGCCCGGCAAGAGCGCGAGGCGCTAGTGTTGCCACTGATTTTCAAGTGCGTGCTGGCCATGATGTTTGCCATCCTGCC CTTGATTACCCTGTTTGGCTTGCGTCGCCGCCAGACCCAACTGGTTGAAAGCCGCCGCCGTTATCAGGGTATTTTCGAGGGGGCAGGCGTTGCCATCTGC GTGCTCGACATGTCCGCGCTGTTTACCTTGCTCGACAGCTTGCAAGTGCGCAATGCCGAGGATCTGGACAGGCTGATCAAACACCAGCCCAGCCAGTTCA AACGGCTGCTCCAGCAATTGCACATCACAGAAGTCAATCAGTTCGCGCTGGACCTGCTGGGTATCGAGAACAGTCAGCAGGCCTGGGACTCGCTGATCGA CGCAAACCCGAGAAACCCCGCAGGCCCAGGAACACGGATCATCCGCGCGGTCCTTGCCAATGAGCCGAGTCTGGAGCTGGAAATTCGCCTGACCCGTGAC GCTGGTGAAGACCAGCATCTCTGGCTGGTCATGCGCCTGCCCGAAGAGCAGAGCGACTACGACTCGGTGATTCTCAGCATTGGCGACATCACTAGCCGCA AGCAGATGGAACTGTCGTTGCTGGACCGCGAAAGCTTCTGGTCCGACGTGGTTCGGACCGTGCCCGATCACCTGTACGTGCAAGACGTGCCCAGCCAGCG GATGATCTACAGCAACCACCATCTGGGGCAGACGCTGGGTTACAGCAAGACTGAACTGCAAAGCATGGGTGAGTTTTTCTGGGAGTTGCTGCTGCACCCC GACGATGCCAGCAACTACCGGGACATGCGCCTGCGCCAACGCCATCATGGGCACAACGAACTGCTGCAATGCGTACTGCGCTTTCGCGACTGCCAACAGA GCTGGCGCCATTTCGATATCCGCGAACAGGCGATGGCCTGGGACAAGGATGACCAGGTCACGCGGATCATCGGTATTGCCAAAGACATCACCCACCAGGT GACCGCCAGCCAGTCGCTGCGCGACAGCGAACAGCGCTACCGGATGCTTGCCGAAAGCATCAGCGACGTTATCTTCTCCACTGATCGGGGTCTGGAACTC AACTACGTCAGCCCGTCAGTCGAAACGGTACTGGGCTACAGCGCCGACTGGATTGTCCGCAATGGCTGGAGCGCGGCGCTGGCTAACCCGCAGCAACTGA CCGGCATCTACAGCCTGATCGTTCGTATCCGCAAAATGTTGAACAAGCCGCACGACCTGGAGCGGCTGCGCAACGAAGTGCCGACCCGTCAGTTCGTCTT CGATTGCCTGCGCGCCGATGGCCGCAAGATTCCTATTGAGCTGCGCCTGGTACTGGTCTGGGACGAGCATGGCAGTTTCGAGGGCATCCTGGGCGTCGCC CGCGACGTCAGCCAGCAACGCCGGGCTGAAAAAGACCTGCGCATGGCGGCTACGGTTTTCGAGCACTCGACTTCCGCGATCCTGATCACCGACCCGGCCG GTTACATCGTGCAGGCCAATGATGCTTTCACCCGGGTCAGTGGCTACGAGGTCCACCAGATCCTGGACCAGTTGCCGACCCTGCTGACCGTAGAGCACGA AGAGGCGCACCTGCACCAGGTGCTCCGGCACCTTAACCAGCGCGGCAACTGGGAAGGCGAGGTTCAGCTCAAGCGCCGCAACGGCGAGCAATACCCGGCC TGGGTCGGGATCACCGCAGTCCTTGATGATGAAGGCGACCTGGCCAGCTATGTGTGCTTCTTCAGCGACATCAGCGAGCGCAAGGCCAGCGAGCAGCGCA TTCATCGCCTGGCCTACTACGACGCCCTGACCCACCTGCCCAACCGCACCCTGTTCCAGGACCGCCTCCATTCGGCATTGCAGCAGGCCGAGCGCCAGAG CGCCTGGGTGGTGCTGATGTTCCTCGACCTCGACCGTTTCAAACCGATCAACGACTCGCTCGGCCATGCCGCCGGCGACCGCATGCTCAAGGAAATGGCC AGTCGGCTGCTGGCCTGCGTGACTGATGACGATACCGTGGCACGCATGGGCGGCGACGAATTCACCCTGCTGCTGCACTCCGGCGCTACCCGTGAGGTTG CCCTGAACCGCGCCATTCATGTGGCCGAACAGATTCTCAACAGCCTGGTCACGCCGTTTGTTCTGGAGGGCCGCGAGTTCTTCGTCACTGCCAGTATCGG CATTGCCCTGAGTCCCCAGGATGGCCATGAACTGAGCCAGTTGATGAAGAACGCCGACACGGCGATGTATCACGCCAAAGAGCGCGGCAAGAACAACTTC CAGTTTTACCAGGCCGACATGAACGCAACCGCGCTGGAACGCCTGGAGCTGGAAAGCGATCTGCGCCACGCGCTGGAACAGGAAGAGTTCGTGCTTTACT ACCAACCGCAGTTCAGCGGCGACGGCAAGCGCCTGACCGGCGCCGAGGCACTGCTGCGCTGGCGCCATCCACGACGCGGGCTGGTGCCACCGAACGACTT CATTCCAGTGCTCGAAGAGCTTGGCCTGGTCATGGAAGTTGGCGACTGGGTACTGGCCGAGGCCTGCCGCCAGCTCAAGACCTGGCACCAGGAACGGGTT CGGGTGCCGAAGGTGTCGGTCAATATTTCTGCCCGTCAGTTTGGCGACGGGCAACTGGGCGAACGCATCGCTGCCACCCTCAGGGACACCGGGCTGCCCC CGGCCTGCCTGGAGCTGGAACTGACCGAAAGTATCCTGATGCGTGAAGTCGGCGAAGCCATGCAGACCCTGGCCGGCCTCAAGAATCTCGGTTTGAGCAT CGCGGTTGACGACTTTGGCACCGGCTACTCATCGCTCAACTACCTCAAGCAGTTCCCGATCGATGTGCTCAAGATCGATCGCTCCTTCGTCGATGGTTTG CCCTCGGGCGAGCAGGATGCACAGATTGCCCGGGCGATCATCGCCATGGCGCACAGCCTGAACCTGTCGGTGATCGCCGAAGGCGTGGAAACCCACGAGC AACTGGACTTCTTGCGCGAGCATGGCTGCGACGAGGTACAAGGCTACCTGTTCGGCCGCCCGATGCCGGCCGGGCAGTTCGAGGCCCAGTTCAGCAATGA CGCACTGTTCATGCTGGATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCGGCGGCAGGCGGCTTCAGCCGCGATGGGGTCAGGCCAGGCACAGCAGAGGTGTCGCCTGGTCAATGTTCGCGGATGAATCCGCTCCTACGAGCTTGC AGCTGCTTCACCCGACGGATGAGGCCCTTTCATATGCCAGAGATTCTCTGATGGGGTAGAATGCCCCCCTTTTCCGCTCCAAGCCCTCGAGGACAGCCAT GTTCAGCCGTGATTTGACTATCGCCAAGTTCGACCCCGATCTTTTTGCCGCCATGGAACAAGAAGCCGTGCGCCAGGAAGAGCACATCGAGCTGATCGCT TCGGAAAACTACACAAGCCCCGCAGTGATGGAAGCTCAGGGCTCGGCGCTGACCAACAAGTATGCCGAAGGTTACCCGGGCAAGCGTTACTACGGTGGTT GCGAGTACGTCGACATCGTTGAACAACTGGCCATCGACCGCGCCAAAGAGCTGTTCGGTGCCGACTACGCCAACGTCCAGCCGCACGCTGGCTCCCAGGC
Amino Acid Sequence
>diguanylate phosphodiesterase
MPTPTASTSSRSVKNSSQLPVRGSLKGALAALVLVMLALLLWQSFEQFQQTQERQRQRSLDYSMQLADRLSLNLTLSAQVSVSLLDEAVSVGQSLEQPST LDNLRQALPALQSVAWLSPAGDIIKDSAMGAGDAAFLKEQLRKAQGKPYYYTNASDGRLVYLLVRQAGGITGDYWALRLGREALKPLTQQPSHDFMHLWR LENRDQSQIIARDGHRSNGNLQTVLLQPISNSDWQLHGLFDARQEREALVLPLIFKCVLAMMFAILPLITLFGLRRRQTQLVESRRRYQGIFEGAGVAIC VLDMSALFTLLDSLQVRNAEDLDRLIKHQPSQFKRLLQQLHITEVNQFALDLLGIENSQQAWDSLIDANPRNPAGPGTRIIRAVLANEPSLELEIRLTRD AGEDQHLWLVMRLPEEQSDYDSVILSIGDITSRKQMELSLLDRESFWSDVVRTVPDHLYVQDVPSQRMIYSNHHLGQTLGYSKTELQSMGEFFWELLLHP DDASNYRDMRLRQRHHGHNELLQCVLRFRDCQQSWRHFDIREQAMAWDKDDQVTRIIGIAKDITHQVTASQSLRDSEQRYRMLAESISDVIFSTDRGLEL NYVSPSVETVLGYSADWIVRNGWSAALANPQQLTGIYSLIVRIRKMLNKPHDLERLRNEVPTRQFVFDCLRADGRKIPIELRLVLVWDEHGSFEGILGVA RDVSQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANDAFTRVSGYEVHQILDQLPTLLTVEHEEAHLHQVLRHLNQRGNWEGEVQLKRRNGEQYPA WVGITAVLDDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHSALQQAERQSAWVVLMFLDLDRFKPINDSLGHAAGDRMLKEMA SRLLACVTDDDTVARMGGDEFTLLLHSGATREVALNRAIHVAEQILNSLVTPFVLEGREFFVTASIGIALSPQDGHELSQLMKNADTAMYHAKERGKNNF QFYQADMNATALERLELESDLRHALEQEEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPNDFIPVLEELGLVMEVGDWVLAEACRQLKTWHQERV RVPKVSVNISARQFGDGQLGERIAATLRDTGLPPACLELELTESILMREVGEAMQTLAGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGL PSGEQDAQIARAIIAMAHSLNLSVIAEGVETHEQLDFLREHGCDEVQGYLFGRPMPAGQFEAQFSNDALFMLD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site