Pseudomonas sp. RIT288, BW33_RS12275

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Coils	Coil	Coil	-	-	321	341	-
CDD	cd12914	PDC1_DGC_like	-	-	69	196	4.22632E-21
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	341	499	1.77641E-67
CDD	cd12915	PDC2_DGC_like	-	-	198	296	6.0642E-14
PANTHER	PTHR45138	REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM	-	-	296	500	1.0E-72
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	339	497	1.5E-50
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	335	499	1.2E-52
FunFam	G3DSA:3.30.70.270:FF:000001	Diguanylate cyclase domain protein	-	-	334	501	9.9E-56
Pfam	PF02743	Cache domain	IPR033479	Double Cache domain 1	46	285	2.7E-14
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	197	287	8.6E-21
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	326	500	3.6E-61
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	344	499	2.35E-50
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	328	501	5.1E-72
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	41	194	5.8E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.