Pseudomonas sp. RIT288, BW33_RS04225

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT288 contigs10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGCAAAGGGGCGGATTGGTAGCTGAGTAACACTCCACTGAATGGCACCCTCAGGGCTGATCGCATAAACCGGCATACCCCTAGCACGCCGCGCTGCCTG CCATGTCGTTTCACCTGTCTGTCGGAGATTGCCATGCACAGCAGCAAAACCCTGTTCATCACCGGGTGATCGGTACCCTGCGCAACGAGGCCAATCTGAA ACCCTTCGAAGCCCTGTCAGCGGATCGGGCACACGGTGTGTTGCTCGACGTCACCGATTTCGAACGCATCGACGGGCTCCCCTACTCTCGGATCCTGACC GGTGCCCAGGGCGGTTCGATGCGTGCGGCGCTCCAGCAGCAAGGACATTTCGGCAAGGTCCGCCGCGGCCTAAAGGCAAAATCCCCGCGCATTCACTACG CTTGAGAAATCCGCCGCAGCGCAATCGCCAGCAACAGATTGAACATTGCGCCCAGGCCGCTGTTCCAGATGAGCAAACCCAAGCTACCAAGGACGAGCAT
DNA Sequence for Gene
>BW33_RS04225
ATGGACAGTTTCGCTCCTGCTACGCCGGTTCCGCCTCAGCAAAGCGCAATCACCCGCCGCCTGGCGTTTGCGGTCGGCACACTGTTTATCGTCGGGGTGA TTGCCGCTATCGGCACCCTGCTCGGCATTGCCGCTCGCCTGGATCGCGAGGATGTCGAGCAAAACCGCTTCTACATGGCCCGAGCGCTGGAAAATCGCAT CAGCACCTCAAAGAGCTACATCACCAGTTATGCCGACTGGACCACGGCTTACGAGCACTTGCACAACCAAGTCGATACCGACTGGGCGTACACCCAACAG AACATCGGCAAGACGCTGTTCACCACTGACGGTTATGACGGCGTGTTTGTGCTGGATCGGCAGGGCACCAAATACGCCGTGGTGCAAGGACAGCAGGAAG ACGCGGACATCGCGCGCTGGCTCGCGGTGCCTGCCGCGTCGCTGATTGAGCGGGTGCAAAACCAGTCCGAGTTGACTGTGCCTGTCAGCACTTACTCGCT CTTCGACGGCTGGCCGGCGCTGGTCACGGCAGCGGCCATTCTGCCCAACGATGAGCGTCCGGTGGGCGATCCGAAACAGACCTCGGTGCTGGTATTCGTC GACAAGCTGACACCGGCCAAACTGCAAGCGCTTGGCGTGGCCTATGGCCTGAACAACCTGACTCTGATTCCGGATGAACAGCTCAGCGGGGAGCAACCAC GCGTGCCGCTGGACAGCACCGGTTTCAGCTTGACGGCAGGTCTGAAGCGACCCGGGCAGCAATTGTTGTGGTCATTGCTGCCAACACTCGGCAGCGTGCT GGCAGTGCTGATGCTGCTGACCGCCTATTTCCTGCGCCACGCCGTGCGATCTTCGACCTATGTCGACCACAGCTTCAGCACATTGAAGACCTCGAATCAG GCGCTGGAGGCGGCCAACCATGCACTGGAAGCCAGTGAAGAACGCTTTCGCGCGGTGGCCGAAGCCGCGTCGGACTGGATCTGGGAAGTCGACAGACACC TGCGCCTGACCTATCTCTCGGCGCGCTTCAGCGAGGTGACCGGCTACCCGCAAAGCGAGTGGCTGCGCCAAGGCATCGGGCAACTGCTGTCCTGCGATAC CACGCCGCTGGAGCTGTGGCTGAAAAAACTTACCGAAGACAGCAATGCCAGCGACCTGCGTTGCACCTACCGTGATCACGCCGGGCAGCAACGCCACTGT CGGCTCTCAGCGCGGCCGATTATCGAAAAGCAAACCGTGGTCGGCTATCGCGGCACCGCCAGTGACATCACCGACGAAGTCGCTGCCCATGCGCAGATCC AGCACCTGTCGATGCACGACGCCCTGACCGGGCTGCCCAATCGCAACCAGTTGGCGCGTTATCTGGATGAGGCGCTGTTGCTCAAGGAACATGCCGCACC GTTGTCGCTGCTGGTGATTGACCTGGACAACTTCAAGCCGATCAACGATTCCCTCGGCCATCCGGCCGGTGATGCGGTGCTGCAGGAAGTCGCCAGTCGC CTGCGCGAATGCACCCGTGAGCACGACATCGTCGCCCGCCTGGGCGGTGACGAGTTCGTCGTGGTGCTCAATGGCATGGACACTCGGCAAGAGGTCGACA GGTTCTGTACCCGGCTGGTCGAGAGCCTGCATCAACCGATGGTCTTCGAGCACCATCCGCTGCACGTCGGCGCAAGCATCGGTATCGCCCTGAGCCGCCG CCAGGGTTTCGTGCCCAGCGAGTTGATCCGTTGCGCCGACATCGCGCTGTATCAGGCCAAGTCCGAGGGCAAGAACACCTGGTGTTATTTCGAAGCGCAC ATGAACGACCAGATTCAGACCCGCCGGCAAATGGAAAGCGATCTGCGTGGCGCGTTGAAGAACGAGGAATTCATCCTGCATTACCAGCCGCGCTACACCG TCGACGGCAAGCACATCGTCTCGGTCGAGGCATTGGTGCGCTGGCAACACCCGACCAAGGGGCTGCTGGGGCCGGACGTGTTCATCGGCCTGGCGGAACA GACCGACCTGATCGTGGCACTGGGGCGCTGGGTATTGCGTGAAGCCTGTGAAACCGCACTGAGCTGGCCGTCGGACATTCTGCTCTCGGTCAATCTGTCC CCGGCGCAGTTTGCCCTCAGCGACGTCGTCGAAGACGTGCGCGAAGCGCTGATCCAGACCCGTTTCCCGGCCAGTCGCCTGGAACTGGAAATCACCGAAA ACGTGATGCTCATCGACACCGACGGCGCGCTGACCACGATGAATGCGCTCAAGGAACTTGGCGTGCGCCTGAACATGGACGACTTCGGCACCGGCTATTC GTCCCTCGGCTACCTGCGCGCCTACCCGTTCGACGGGATCAAGATCGACAAACGCTTTATCGCCTCGATCAGCAACGGCGCCAACGATCGCGCCGTGGTT CAGGCGATCATCGGCCTGGGCAAAGCCATGGGCCTGACCGTCACCGCCGAAGGCGTGGAAACCGAAGAGCAACTGGAGATTCTCGGCAAGGATCAATGCA ACGAGGTGCAGGGCTATTTCATGAGTCGACCGATCGACAAGACCGCGTTTGCGCAGTTGTTGAAAAGCGCCAGGGCCGAGCCTGCCATTCATCCATCACC GAAGAAAGGGCGTGTCATCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGACCCGTTCAGGGAACTTCAACTATCGTATCTGGACAATCGACGCTTCCAGATACCGACCATCGAACCCACGCTCAGGGAAAGACCAACAATGGCCAC TTATATAGTGCTGACAAAAGACGGTGTCGCAGATAATGGCCAGGAGGAGCTGCTTGCCGATCTGGCACAAGCCCTCAAAAAACCTGATGCGAAGTTGTTG TTGCACCTTCACGGCGGCTTGACTGATGAAGCTGCGGCAATAGCCAATGCCAAACGACTCTCCGGCACTGAACCAAGCAGCTGGAACCTCGGTGATGACT GGACGCAAGTCTATGTCGTGTGGCGAACAGGTGCGCTTGAAACCATCCAGACCAACTGGACCGAGCTAGTCCACGACGATCGTCTCTATCAAACCATTCA GCGCAAGTTACTGGCCTTTGTCGCCCGTAAACTCGGGGTATCGATCCCCGGAGCTCGTGGGGCGAAACCGGTCGTACTTTCCGAAGCGCAGATCCAACAA
Amino Acid Sequence
>histidine kinase
MDSFAPATPVPPQQSAITRRLAFAVGTLFIVGVIAAIGTLLGIAARLDREDVEQNRFYMARALENRISTSKSYITSYADWTTAYEHLHNQVDTDWAYTQQ NIGKTLFTTDGYDGVFVLDRQGTKYAVVQGQQEDADIARWLAVPAASLIERVQNQSELTVPVSTYSLFDGWPALVTAAAILPNDERPVGDPKQTSVLVFV DKLTPAKLQALGVAYGLNNLTLIPDEQLSGEQPRVPLDSTGFSLTAGLKRPGQQLLWSLLPTLGSVLAVLMLLTAYFLRHAVRSSTYVDHSFSTLKTSNQ ALEAANHALEASEERFRAVAEAASDWIWEVDRHLRLTYLSARFSEVTGYPQSEWLRQGIGQLLSCDTTPLELWLKKLTEDSNASDLRCTYRDHAGQQRHC RLSARPIIEKQTVVGYRGTASDITDEVAAHAQIQHLSMHDALTGLPNRNQLARYLDEALLLKEHAAPLSLLVIDLDNFKPINDSLGHPAGDAVLQEVASR LRECTREHDIVARLGGDEFVVVLNGMDTRQEVDRFCTRLVESLHQPMVFEHHPLHVGASIGIALSRRQGFVPSELIRCADIALYQAKSEGKNTWCYFEAH MNDQIQTRRQMESDLRGALKNEEFILHYQPRYTVDGKHIVSVEALVRWQHPTKGLLGPDVFIGLAEQTDLIVALGRWVLREACETALSWPSDILLSVNLS PAQFALSDVVEDVREALIQTRFPASRLELEITENVMLIDTDGALTTMNALKELGVRLNMDDFGTGYSSLGYLRAYPFDGIKIDKRFIASISNGANDRAVV QAIIGLGKAMGLTVTAEGVETEEQLEILGKDQCNEVQGYFMSRPIDKTAFAQLLKSARAEPAIHPSPKKGRVI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site