Pseudomonas sp. RIT288, BW33_RS01755
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: TTCATGCACC-N7-GGTGCATGAA | 389369 | 389395 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TGGCGAGGGAGCTTGCTCCCGCT-N83-AGCGGGAGCAAGCTCCCTCGCCA | 389494 | 389622 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CCCCTGTAGGAGCTG-N70-CAGCTCCTACAGGGG | 391228 | 391327 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: AGGCTGCGATCTTTTGAT-N18-ATCAAAAGATCGCAGCCT | 391247 | 391300 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: AAAAAGGCGATCC-N4-GGATCGCCTTTTT | 391341 | 391370 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 115 | 391244 | 391302 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 116 | 391248 | 391299 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 117 | 391346 | 391365 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 118 | 391346 | 391365 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |