Pseudomonas sp. MT-1, MT1_RS05555

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd01949 GGDEF IPR000160 GGDEF domain 374 529 1.286E-59
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 371 533 1.2E-53
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 129 239 2.56E-8
FunFam G3DSA:3.40.50.2300:FF:000346 Diguanylate cyclase response regulator - - 242 370 2.4E-56
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 377 532 2.59E-47
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 126 233 1.9E-7
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 374 528 2.3E-43
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 193 535 2.1E-87
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 367 532 9.2E-51
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 119 233 0.035
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 245 358 1.5E-26
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 239 373 1.2E-31
Gene3D G3DSA:3.40.50.2300 - - - 241 370 1.8E-30
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 370 530 8.7E-48
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 247 358 1.5E-23
SMART SM00267 duf1_3 IPR000160 GGDEF domain 361 532 1.1E-53
Coils Coil Coil - - 35 62 -
Gene3D G3DSA:3.40.50.2300 - - - 121 240 3.7E-8
CDD cd00156 REC - - 248 348 5.18904E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.