Strain | Pseudomonas sp. MRSN12121, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TGGCCGGGGATGCCGGGCGCGGTTTCGCGGTGGTGGCCGACGAGGTGCAGCGCCTCGCGGAGCGTTCTTCGGCGGCCACCCGGCAGATCGAGAACCTGGT GCGGGCGATCCAGACCGACACCAACGAGGCGGTGATCTCCATGGAGCAGACCACCTCGGAAGTGGTGCGCGGTGCGCGGCTGGCGCAGGATGCGGGGGTG GCCCTGGAGGAAATCGAAGGCGTCTCCAAGACCCTGGCGGCGCTGATCCAGAGCATCTCCAACGCGGCCCAGCAGCAGACGTCGTCGGCCGGACAGATAT CCTTGACGATGAACGTGATCCAGCAGATCACTTCACAGACTTCGTCCGGCTCGACCGCGACGGCCGAAAGCATCGGTAACCTGGCGAAAATGGCCAGCCA ACTGCGGCGCTCGGTGTCCGGCTTCACCTTGCCGGCGAGTCGCGAGCAGACGCCGCGGGAAAACCGCTGAGGCCGGAGCACGATTTCGATGGGAATGGTT
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DNA Sequence for Gene |
>TO66_RS29460
ATGGGTGGCCGGCACGACTATGTGGCCCTGGAGTGGGTCAAGGGCGAAATTGCCGAAACGCTGAAGCAGGCCCACCAGGCGCTCGATCGCCTGGTCGACG AGCCGCAGGCGGTGGCGGCCCTCGACCAGTGCCTGGAGTGCATCCATCAGGTCCATGGCAGCCTGCAGATGGTCGAGTTCTATGGCGCGGCGCTGCTCGC CGAAGAAATGGAAGCCCTGGCCCAGGCGCTGCGCGAGTCCCGCGTGGCCCAGCGCGACGAGGCGATCTACCTGCTGCGCCAGGCCATCAGCCAGTTGCCG CAGTACCTTGAGCGGGTGCAGGGCGCGCGCCGCGACCTGCCGCTGGTGGTGCTGCCGCTGCTCAACGACCTGCGCAGCGCCCGCGGCGAAAGCCTGCTGA CCGAAACCAGCCTGTTCAGCCCGCAACTGCCGGACCTGCCGCCGCTGGACGAGGCGACCCTGGACCGCCTGGCGCCCCCCGACCTGACCATCCTGTTGCG CAAGTTGCGGCACATGTTGCAGACCGCGCTGGTCGACTTGCTGCGCGAGCAGGACGTGAAGGCCAGCCTGGGCTACATGGCCAAGGTGTTCGAACGTCTC CAGGGGCTTTGCCAGGACGCGCCGCTGGGGCCCTTGTGGCAGATCTCCCTGGCGCTGGTGGAAGGCATCGGCAGCGGCGCGATCGCCAACAGCCCGGCGG TGCGCAGCCTGCTCAAGGATGCCGACCGCGAACTCAAGCGCCTCTATGAACAGGGCATCGCCGGGATCAACCAGCCGGCCCCGGACGAACTGCTGAAAAG CCTGCTGTTTTACATCGCCAAGGCCCGTTACCCCACCGCGCAGATGCAGACCATGAAAGACGCCTACGGACTCGATGACGCTGTGCCCGACAACGCCCTG GTCGATCAGGAGCGCGCCCGCATGGCCGGTCCGGACCGCGACGCCATGCGCTCGGTGCTGGCGGCCCTGTGCGAGGAGCTGGTGCGGGTCAAGGAGCGCC TGGACCTGTTCGTGCGCAGCGACCGCCAGCACGCCTCGGACCTGGACAGCCTGCTGGCGCCCCTGCGGCAGATCGCCGACACCCTGGCGGTGCTGGGCTT CGGTCAGCCGCGCAAGGTGATCATCGACCAGCTCGCCGTGGTGCTGAGCCTGGCCCAGGGCCAGCGCGAGCCGAACGACGCAGTGCTGATGGACGTCGCC GGGGCCTTGCTGTACGTCGAGGCGACCCTGGCCGGCATGGCTGGCCCGGCCGAGCCCGAGAGCCGCGAAGACAGCCGCCTGCCGACCACCGACCTGACCC AGATCCATCAACTGGTGATCAAGGAAGCGCGGGTCTGCCTGCAGCAGGCCAAGGATCTGATCGTCGACTACATCGACGCCGGCTGGGAGCGCGAACGCTT GCAGCCGCTGCCGGAGTTGCTGACCCAGGTGCGCGGGGCCCTGGCGATGATTCCCCTGGGCCGGGCGGCGGGCCTTCTGCAAGCCTGCGTCGGCTTCGTG CGCGAACACCTGTTGCTGGATCCGCGCCGGCCGGGCTGGCAGCAACTGGACAGCCTGGCCGACGTGATCACCAGCCTCGAGTATTACCTCGAGCGCCTGA GCGACGATCACCAGGCGCCGGGGGAGAAGATCCTCGACGTCGCCGAACAGGGCCTGGCCGCGCTGGGCTATACGCCGGATGTAGCGGTGGCGGACGACCA GGTGCCGCTGCTCAGCGATGTGCTCAGCCCCAGCGAAGCCCTGGTGATGCAGGACCTGCAGGAGCTGGACAGCCCGGAAGTGGTGCAGTCCCTGGCCGAG GTCCTGGCCAGCCCGGTCTCGGTGCTCAACCCGCCGGCGCTGGACACTCCGGACAGTCTATTGCCGCCGCCGGGCGATGAAGATCCGGTGGACGACGAGT TGCGCGAAGTCTTCCTCGAGGAGACCGATGAGGTGCTCGACGTGCTGCGCGAGTACCTGCCCCTGTGGGTCGCCGATCCCCATGGCAAGGCGGCGCTGGG TGAGCTGCGGCGGGCCTTCCACACCCTCAAGGGCAGTGGGCGCATGGTCCGCGCGCTGGTGTTGGGCGAGCTGGCCTGGGCCGTGGAGAACCTGCTCAAC CGGGTGCTGGAGAACAGCGTCGAGCCCGGGCCGTTGGTGCGGCAACTGCTTGAAGACGTGTTGCAACTGCTGCCCGAACTGGTCGACGAATTCGCCGCCC AGGCCCAGCGCCAGCGCGACGATGTCGACCGGCTGGCGGCCCGCGCGCATGCCCTGGCCCGGGGCGAGGCGACGCTGGCGGACGAAGTGCAGGACGGGCT CGATCCGCAGTTGCTGGAGATCTTTCGCAACGAGGCCGAAACCCATCTGGAGAGCCTCAAGCGTTTTCTCGAGCGCGCCGCCGAGCACCTGCCCCTGCAG GCCAGCGACGAATTGCAGCGGGCCCTGCATACCCTCAAGGGCAGCGCCCATATGGCCGGTGTGCTGCCGATCGCCGAGCTGGCGGCGCCGCTGGATCTGT TGGCGCGGGAATACCGTGCGCACCTGATGGCCCTGGACCTGGACGAAATCGAGCTGCTGCAAGAGGCCGAAGGCCTGTTCCGCCGTGGCCTGCAACAGCT GGGCAGCGACCCGCTGGCGCCCATCGACGGCGCCGCCGACCTGGTCGAGCGGGTCCGGGCACTGACCGCCGCGCGCCTGGCCAGCCTGCTTGAGGCCCCC AACACCGGGCTACGGGTCAAGCGCGATGCGCAATTGATCAGCAACTTCCTGGCCCAGGGCATGGACATCCTGCTGGACGCGGAGAACCTGCTGCGCCGCT GGCGCCAGCACCCGGGCGAGCGCCAGGAACTGAGCGACCTGCTGGACGAATTGACCACCCTCGGCGAAGGCGCGCACCTGGCGGACCTGCAACCGATGGA CGAGCTGTGCGAGGCGCTGCTGGACCTGTACGGCGCGGTGGAAGAAAGCAGCCTGGTGGTCGGCGAGCGCTTCTTCCACGAGGCAGAAAAGGCCCACGAA GCCTTGATCGACATGCTCGACGAACTGGCCGCCGGGCAGGAAGTCAGCCCGCAACCGGCGCTGATCCGCGCGCTGCACGAACTGCTGGAGGAAGGTCTCG ACCCGGCGGCCATGGGGTTGATCCGCAGCGATGGCAGCCGCACCCTGAGCATCACCGACCTGACCCGCGCTACCGCGCAAATGCAGCACGAGGCGCAGAG CGAGGTGGCGGGACCGGACGCGGAAATCGTGGCGATCTTCCTCGAAGAGGCGGTGGATATCCTCGACAGTGCCGGCCAAGCCCTGCAGCGCTGGCTGGCC GACCCGGACAACGGCGCGCCCTTGTCGTCCCTGCAGCGCGACCTGCATACCCTCAAGGGCGGCGCGCGGATGGCCGAGGTCGGGCCGGTGGGCGACCTCG CCCAGGAGCTGGAAAACCTCTACGAAGGCCTGGTGGATCGCCGTTATCAGCATGGCGAGGCACTGGCCGACCTGTTGCGCCGCAGTCATGAGCAGTTGGC GCTGCTGTTGCAGCAATTGCAGGCGCAGCAAGCCTTGAGCGATCCGAAGGCGCTGATCGAGACGATCCGCGGGTTCCGCCAGCGCAGCGGGGTCGCCAGC GAGCTGCCCGAGACGGCGGTGAGCGATGACGCGGCGGCGCACGATCCGGAACTGCTGGAGATCTTCCTCGAAGAAGGTTTCGACATTCTCGACAGCTCCG GTGCGGCCCTGGCGCGCTGGCAGGCCGAGCCGAGCAGCCGCCAGGAAGTGGAAACCCTGCTGCGCGACCTGCACACCCTCAAGGGCGGTGCGCGCATGGT GGAAATCGCACCGATCGGCGACCTGGCCCACGAGCTGGAGTTTCTCTACGAGGGCCTGTCCAGTGGCCTGTTGCAGGCGACGCCGGCCCTGTTCGGCCTG TTGCAGAAGAGCCATGACCGGCTGGCGCAGATGCTCGACGCCGCCCGCGCTGAACAGCCGATCAAGCCGGCCGAGAGCCTGATCGAGGCGATCCGCGGCT TCACCCATCCGGTGCAGGCCGCAACGCCGCCCCTGGTGCTGCCGGACCTCTCGCCGCCGGGCAAGCCCGAGCCACCGGCGGCGCCGGCAGAGGCCGGGGA CATGGTCAAGGTCTCGGCCGAGCTGCTCGACGACCTGGTCAACCTGGCCGGGGAGACGTCGATCTTCCGTGGACGCATCGAGCAGCAGGTCAACGATGCG CGGGTCGCCCTGAACGAAATGGAGACCACCATCGAGCGTATCCGCGACCAGCTGCGGCGCTTGGACACCGAAACCCAGGGGCGGATTCTCAGCCGCCAGC AGGTCGAGGCCGAACGCCTGGGGTACGAGGAATTCGACCCGCTGGAGATGGACCGTCATTCGCAGTTGCAGCAACTGTCGCGGGCCTTGTTCGAGTCGGC GTCCGACCTGCTCGACCTCAAGGAAACGCTGGACCGGCGCAACCAGGACGCGGAGAACCTGTTGCAGCAGCAGGGGCGGGTCAACACCGAGCTGCAGGAA GGCCTGATGCGCACGCGCATGGTGCCGTTCGAGCGCCTGGTGCCGCGCCTCAAGCGCATCGTCCGGCAGGTGGCCGAGGAGCTGGGCAAGGACGTGGTGT TCAGCGTCGGCAATGCCGAGGGCGAGATGGACCGCAACGTCCTGGAGCGCATGGTCGCGCCCCTGGAGCACATGCTGCGCAACGCCGTCGACCATGGCCT GGAGTCCGCCGAAGTGCGCCGCGCCGCGGGCAAGCCGGAGCAGGGGCGGATCACCCTGGACCTGTCCCACGAAGGCGGCGATATCGTCTTCGACATGCGC GACGACGGCGCCGGGGTGCCGCTGGAGGCGGTGCGGCGCAAGGCGATCAAGCGCGGCCTGCTCGACCCCAACGCCGAGATCAGCGACCGCGACGTGCTGC AATTCATCATGCAGCCGGGGTTTTCCACGGCGGAGAAGATCACCCAGATTTCCGGGCGCGGGGTCGGCATGGATGTGGTCCATGAAGAGGTGCGCCAGCT CGGCGGCTCGATGACCATCGACTCGATCCCGGGGCAGGGCGTGCATTTCCGCATTCGCCTGCCGTTCACCGTGTCGGTCAACCGGGCGCTGATGGTGCAG TGCCAGGACGAGCAGTACGCGATTCCGCTGAACACCATCGAGGGCATCGTCCGGGTCGTGCCCCACGAACTGGAAAGCTATTACCAGCTCGATCCGCCGC ACTACGAATACGCCGGCCAGCGCTATGAGCTGTGCTATCTCGGCGAGCTGCTGCACACCGTGCCGCGGCCGAAACTGTTGGGCCAGAGCCTGCCGCTGCC GGTACTGCTGGTGGACTACAACGAACACCGGATCGCGGTTCAAGTGGACGCCATGGCCGGCACCCGGGAAATCGTGGTCAAGAGCCTGGGCCCGCAGTTC GCGGCGGTGCAGGGCTTGTCCGGGGCGACCATCCTCGGCGATGGCCGGGTGGTGCTGATTCTCGACCTGCTGGCACATATCCGCGCCTTGCAGGCGCGGC CACCGGCGCCGCGGGCGGTGGATGACGAAGCGCCGGCGGAGGCCGCACCGCTGCGGCCGCCGCTGGTGCTGGTGGTCGACGATTCGGTGACGGTGCGCAA GGTCACCAGCCGCCTGCTGGAGCGCCACGGCATGAACGTGCTGACCGCCAAGGACGGGGTCGACGCCATGGCGCTGCTGCAGGAGCACACCCCGGACCTG ATGCTGCTGGACATCGAAATGCCGCGCATGGACGGTTTCGAGGTGGCGCAGCAGGTGCGCGCCGACCCGCGCCTGCGGCAGTTGCCGATCATCATGATCA CCTCGCGCACCGGGCAGAAACACCGCGACCGGGCGATGGCCATCGGCGTCAACGATTACCTCGGCAAGCCTTACCAGGAGTCGGTGCTGCTGGAGAGCAT CGCCCAGTGGAGCAGACCCCATGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTACCGCGCCAGCTTCCTCACCGGGCTGCTGCTGCCCCTGGCCGACCGCACCCTGATCCTGCCCAATGTCGCCGTCGCCGAGCTGATCGACTACCAGCGC GGCGAACCCGCCAGCGACGCGCCGCCCTGGTACCTGCGCGCGGTCGCCTGGCGTGACCGCCAGCTGCCGCTGATCAGCTTCGAGGCCGCCTGCGGCCAGC CCCTGGCCATCGGCGAACGCGCGCGCATCGTCGTGCTCAACACCCTGGGCGGCCGCGAACGCCTCAAGTTCATCGCCCTGGTAATCCAGGGCATCCCGCG CTCCTGCCGGCTCGACAGCCAGCTCAGCTACGTCGATGTGCCATTGGCACCGCTGGAGAAAGCGGCGGTGCAGGTGGGGGAGCAGGTGGCGAAGGTGCCG GATTTGCTGGGGTTGGAGGAGATGCTGGTGAAGGCGGGGTTGTCCTAGGCCTTTCCGAAGAACTGATCGTTACCCAAAAGGCCTTGCCCCGCCTCAGCCG
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Amino Acid Sequence |
>histidine kinase
MGGRHDYVALEWVKGEIAETLKQAHQALDRLVDEPQAVAALDQCLECIHQVHGSLQMVEFYGAALLAEEMEALAQALRESRVAQRDEAIYLLRQAISQLP QYLERVQGARRDLPLVVLPLLNDLRSARGESLLTETSLFSPQLPDLPPLDEATLDRLAPPDLTILLRKLRHMLQTALVDLLREQDVKASLGYMAKVFERL QGLCQDAPLGPLWQISLALVEGIGSGAIANSPAVRSLLKDADRELKRLYEQGIAGINQPAPDELLKSLLFYIAKARYPTAQMQTMKDAYGLDDAVPDNAL VDQERARMAGPDRDAMRSVLAALCEELVRVKERLDLFVRSDRQHASDLDSLLAPLRQIADTLAVLGFGQPRKVIIDQLAVVLSLAQGQREPNDAVLMDVA GALLYVEATLAGMAGPAEPESREDSRLPTTDLTQIHQLVIKEARVCLQQAKDLIVDYIDAGWERERLQPLPELLTQVRGALAMIPLGRAAGLLQACVGFV REHLLLDPRRPGWQQLDSLADVITSLEYYLERLSDDHQAPGEKILDVAEQGLAALGYTPDVAVADDQVPLLSDVLSPSEALVMQDLQELDSPEVVQSLAE VLASPVSVLNPPALDTPDSLLPPPGDEDPVDDELREVFLEETDEVLDVLREYLPLWVADPHGKAALGELRRAFHTLKGSGRMVRALVLGELAWAVENLLN RVLENSVEPGPLVRQLLEDVLQLLPELVDEFAAQAQRQRDDVDRLAARAHALARGEATLADEVQDGLDPQLLEIFRNEAETHLESLKRFLERAAEHLPLQ ASDELQRALHTLKGSAHMAGVLPIAELAAPLDLLAREYRAHLMALDLDEIELLQEAEGLFRRGLQQLGSDPLAPIDGAADLVERVRALTAARLASLLEAP NTGLRVKRDAQLISNFLAQGMDILLDAENLLRRWRQHPGERQELSDLLDELTTLGEGAHLADLQPMDELCEALLDLYGAVEESSLVVGERFFHEAEKAHE ALIDMLDELAAGQEVSPQPALIRALHELLEEGLDPAAMGLIRSDGSRTLSITDLTRATAQMQHEAQSEVAGPDAEIVAIFLEEAVDILDSAGQALQRWLA DPDNGAPLSSLQRDLHTLKGGARMAEVGPVGDLAQELENLYEGLVDRRYQHGEALADLLRRSHEQLALLLQQLQAQQALSDPKALIETIRGFRQRSGVAS ELPETAVSDDAAAHDPELLEIFLEEGFDILDSSGAALARWQAEPSSRQEVETLLRDLHTLKGGARMVEIAPIGDLAHELEFLYEGLSSGLLQATPALFGL LQKSHDRLAQMLDAARAEQPIKPAESLIEAIRGFTHPVQAATPPLVLPDLSPPGKPEPPAAPAEAGDMVKVSAELLDDLVNLAGETSIFRGRIEQQVNDA RVALNEMETTIERIRDQLRRLDTETQGRILSRQQVEAERLGYEEFDPLEMDRHSQLQQLSRALFESASDLLDLKETLDRRNQDAENLLQQQGRVNTELQE GLMRTRMVPFERLVPRLKRIVRQVAEELGKDVVFSVGNAEGEMDRNVLERMVAPLEHMLRNAVDHGLESAEVRRAAGKPEQGRITLDLSHEGGDIVFDMR DDGAGVPLEAVRRKAIKRGLLDPNAEISDRDVLQFIMQPGFSTAEKITQISGRGVGMDVVHEEVRQLGGSMTIDSIPGQGVHFRIRLPFTVSVNRALMVQ CQDEQYAIPLNTIEGIVRVVPHELESYYQLDPPHYEYAGQRYELCYLGELLHTVPRPKLLGQSLPLPVLLVDYNEHRIAVQVDAMAGTREIVVKSLGPQF AAVQGLSGATILGDGRVVLILDLLAHIRALQARPPAPRAVDDEAPAEAAPLRPPLVLVVDDSVTVRKVTSRLLERHGMNVLTAKDGVDAMALLQEHTPDL MLLDIEMPRMDGFEVAQQVRADPRLRQLPIIMITSRTGQKHRDRAMAIGVNDYLGKPYQESVLLESIAQWSRPHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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