Pseudomonas sp. MRSN12121, TO66_RS28405
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psem02024 | Quorum sensing | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd13589 | PBP2_polyamine_RpCGA009 | - | - | 32 | 301 | 2.20013E-79 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 135 | 338 | 1.3E-112 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 34 | 331 | 1.3E-112 |
| PANTHER | PTHR30222 | SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN | - | - | 14 | 350 | 1.7E-41 |
| Pfam | PF13416 | Bacterial extracellular solute-binding protein | IPR006059 | Bacterial extracellular solute-binding protein | 61 | 308 | 7.5E-42 |
| SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 31 | 350 | 3.01E-60 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.