Strain | Pseudomonas sp. MRSN12121, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTGTGTGAATCGATGATGGTGATTTTTTTCATGGCGGCACCTGACGGAAAAGGCCTACAGATTCACCTGGGAAAGGGCCGCATCGCTTGTGGGTTTTCTC TGCTGTGGATGACGAAATCGGCACAGCGTGGCTTTCTGCTAACCCGGTAGCCGCTGCCGAGGTACGAGGCTGCGATCGGGTTGGGCGGCATTCCGACGAA GCGGCCGCAAAACCGGCTATCGCGTTCTACCTGATACACCGCAAGCGCTGGCTTTGCGGCAACTGCGTTGCCGATCGCAGCCTCGCTGGTGCTCGGCAGC GGCTACAAGTGCTGCGATGTGGCTGTGGGTGTGGCGGATCAAGGGAGGGCGACGGCGCGGGAAAGGTCTGGGGGCGAATGTGCCGATTTCGTCTTGCTCA GGGGCGAAAAGTCTCAAGCTGCGCGGCGGCGAAAGGCGGAATCTGTTTTGCGTTTCCAACGCCTGTCGGCCCCGCCCGACTCAACCACAAGGACAAGACC
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DNA Sequence for Gene |
>TO66_RS07030
ATGAGCCGTAAAGCCATTCACTGGAGCGGTGTGTTCCCCGCCGTCAGCACCCAGTTCAAGCCCGACTTTTCCCTCGACCTGGACGCCACCCACGGCGTCA TGCGCAATCTGGTGGCCGATGGCGTGTCGGGCCTGGTGGTGTGCGGCACCGTGGGCGAGAACACTTCGCTGAGCACCGCGGAAAAACTCTCGGTGATCGA GGTCGCCAAGGATGCCGCCGGTGGTCGCGTGCCGGTGATCGCCGGGATTGCCGAGTTCACCACCGAGTTCGCCCGCAACACCGTGCGTGAGGCCGCCAAG GTCGGGGTCGACGGGGTGATGGTGATGCCGGCCCTGGTGTATTCGGCCAAGCCCCACGAAACCGCCGCGCACTTTCGCACCATCGCCACCGGCACCGACC TGCCGGTGATGGTCTACAACAACCCGCCGATCTACAAGAACGACGTCACCCCGGACGTGCTGATCGCCCTGCAGGACTGCGAGAACATCGTCTGCTTCAA GGACTCTTCCGGCGACACCCGGCGTTTCATCGACCTGCGCAACGCCGTGGGCGACCGCTTCGTGCTGTTCGCCGGCCTGGACGACGTGGTGGTGGAGAGC ATTGCCGTCGGCGCCGAAGGCTGGGTCTCCGGGATGTCCAACGCCTTCCCCCGCGAAGGCGAGACCCTGTTCCGCCTGGCCCGGGAAAAACGCTTCGAGG AAGCCCTGGCGCTGTACCGCTGGTTCATGCCGCTGCTGCACCTGGATGCGCGTCCGGACCTGGTGCAGTGCATCAAGCTCTGCGAGGAACTGGTCGGTCG CGGCTCCGCGATCACCCGCCCACCGCGCCTGGCCCTGCAGGGCGAGACCCTGGCCGAGGTCAAGGCGATAGTCGCCAAGGCCCTGGCCGAGCGTCCGCAG CTGCCGGACGTCGGCCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGCCGCAGTAGGGCGCTCGCGCCCTGGTCCATGAGAACACCACCCGGCGCTCGCGCGGCGCCGTGCTTCGTCACGTCGGCAGGCTTTCGCGCGATGCCG ACGTGACCTTCGATCTGCCTACTCCAATAACTCAATAAGAAGGCGCGCCTATGTCAGGCCAAGGCAAATTCAAGAAACAGCTCTCTCTGGTCGACCTCAC TTTCATCGGCCTGGGGGCGATCTTCGGCTCCGGCTGGTTGTTCGCCGCCAGCCATGTCTCGGCCATCGCCGGGCCGGCGGGGATCTTCTCCTGGCTGCTC GGCGGTTTCGCCGTCCTGCTGCTGGGCATCGTCTACTGCGAACTGGGCGCGGCGCTGCCGCGAGCGGGCGGGGTGGTGCGTTATCCGGTGTTCTCCCACG GGCCGTTGCTGGGCTACCTGATGGGCTTCATCACCCTGATCGCGTTTTCCAGCCTGGTGGCCATCGAGGTGGTGGCGGCACGGCAATACGCGGCGGCCTG
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Amino Acid Sequence |
>dihydrodipicolinate synthase
MSRKAIHWSGVFPAVSTQFKPDFSLDLDATHGVMRNLVADGVSGLVVCGTVGENTSLSTAEKLSVIEVAKDAAGGRVPVIAGIAEFTTEFARNTVREAAK VGVDGVMVMPALVYSAKPHETAAHFRTIATGTDLPVMVYNNPPIYKNDVTPDVLIALQDCENIVCFKDSSGDTRRFIDLRNAVGDRFVLFAGLDDVVVES IAVGAEGWVSGMSNAFPREGETLFRLAREKRFEEALALYRWFMPLLHLDARPDLVQCIKLCEELVGRGSAITRPPRLALQGETLAEVKAIVAKALAERPQ LPDVGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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