Pseudomonas sp. MRSN12121, TO66_RS07030

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR12128
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psem00330 Arginine and proline metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF51569 Aldolase - - 7 293 5.55E-81
PANTHER PTHR12128 DIHYDRODIPICOLINATE SYNTHASE IPR002220 DapA-like 5 296 2.6E-51
SMART SM01130 DHDPS_2 IPR002220 DapA-like 7 295 1.0E-86
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 41 62 2.0E-10
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 77 95 2.0E-10
CDD cd00408 DHDPS-like - - 11 291 4.9392E-96
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 5 297 3.0E-80
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 134 151 2.0E-10
Pfam PF00701 Dihydrodipicolinate synthetase family IPR002220 DapA-like 9 293 1.5E-57
PIRSF PIRSF001365 DHDPS IPR002220 DapA-like 3 303 1.4E-73

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.