Pseudomonas sp. HMP271, DP64_RS05085

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGATGTCCGGATAACATGCGTGGAAGGCCGGCAGCGCCGGGATCAGGATCAGGCGTGCCAGCGGGCTGGGCACGTCCACACGCAGGCGTCCCCTGGGT ACGGTGGCTGCGCCGGACAGGCTGGTCTCGACATCATCCAGCTCGGCCAGCAGACGCACCACGCGCTCGTAGTAGGCGGCGCCGTCGACGGTGACGTTGA CCTTGCGTGTGGTGCGGTTGAGCAGGCGGACCCGCAGCCGCGCCTCCAGCTGTTGAATCATCTGGGTGACGCTGGTCTTGCCGATCTGCAGCGTTTCGGC CGCCTTGGTGAAGCTGCCGGTTTCCACCACGCGGGCGAAGGCCTGCATTGCATCGAAACGGTCCATCTGCGCTCCGCTGATTGTTTGGTTTTCACGAACA GTCTTGGCCGGGCTCGCGAGTTTATCCAGCCGGGCGGCCGCCCTACAGTGGCTGCGTATTCATCGACGGGTCGGCAGCGACCCCACAAAAGGAGAGAAGC
DNA Sequence for Gene
>DP64_RS05085
ATGGCCCGTGACGTTGTTTTTCCGCCGGCGCGCCAGGCCCTGTACGAGCGCAACCGCTATTCCCCGGCGATCCGCGCCAATGGCTTGCTGTTCGTTTCCG GGCAGGTCGGCAGTCGCGAGGACGGTTCGCCGGAGCCGGAGCTGGAGGCACAGGTCCGACGCGCGTTCGACAACCTGAACGCGATTCTCGACGCCGCAGG CTGCACCTTCGCGGATGTGGTCGACGTGACGGTTTTCCTGGTCGATCCGCCGGCGATCTTCGAGCGCGTCTGGCAGATCGTGGCGCAGTATTGGGGCGCG GCGCCGCATCCGACGCTGACGGCCGTCGGGGTGACCTGGCTCTACGGCTTCCAGTTCGAGATCAAGGTCATCGCCCAACTGCCCGAGGCGGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGGCTCAGCCCAGCAGCGCCACCGTCTTGATCTGCGCCCACAGCGCCTTGCCGGGAACCACGCCGAGCTGGTCCGCCGAGCGCCGGGTGATGCGTGCC AGCAACGGCGTGCCGCCGGCATCCAGGCGCACCAGCACGTGCGCCGGGGTGTCGGCCACCGCCAGCGCCTCGACCCGGACCGGCAGCAGGTTGCTGATGC TGCTGCCTTCGGCACGCTCCAGCGCCAGGCTGACGTCGCGCGCGTGCACGCGAAAACGCAGGCGCTGGCCGATGGCCTGCGGGCGTTGCGAAACCAGCAC CTCGCCGCCCGGAAATACCAGCCGGGTCAGGTGATAGGCGGGGTCGTGTCCGGCGATCTCACCTTCGACCACCACGCCGGCGTCGTCGCTGAAGGCGGTC GGCAGGTCGAGCCGTGCCAGCGTCTCGCGCAGCTCGCCCTGGACAATGGCCCGGCCCTGGTCGAGCAGCACCAGATGATCGGCCAGCCGAGCCACCTCGT
Amino Acid Sequence
>endoribonuclease L-PSP
MARDVVFPPARQALYERNRYSPAIRANGLLFVSGQVGSREDGSPEPELEAQVRRAFDNLNAILDAAGCTFADVVDVTVFLVDPPAIFERVWQIVAQYWGA APHPTLTAVGVTWLYGFQFEIKVIAQLPEAV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site