Pseudomonas sp. HMP271, DP64_RS05085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd02198 | YjgH_like | IPR038743 | YjgH-like | 18 | 127 | 6.57333E-48 |
| Gene3D | G3DSA:3.30.1330.40 | - | IPR035959 | RutC-like superfamily | 1 | 130 | 9.0E-40 |
| Pfam | PF01042 | Endoribonuclease L-PSP | IPR006175 | YjgF/YER057c/UK114 family | 12 | 126 | 1.0E-27 |
| SUPERFAMILY | SSF55298 | YjgF-like | IPR035959 | RutC-like superfamily | 7 | 128 | 7.85E-36 |
| PANTHER | PTHR11803 | 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA | IPR006175 | YjgF/YER057c/UK114 family | 18 | 126 | 7.5E-22 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.