Pseudomonas sp. FeS53a, SZ55_RS05645

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FeS53a scaffold3.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGCAGGTCAATGCTTCACCCACCTTCCCGGCCGGGGCCAGTGGTGCTTCGGGTTTCGCTCGCTGCTTACAGTTGCGGGGGCAGCCATGGCCTGGGCGTT GCGCCGCACCATGTTCCCTGTTGCTCCGGGCGGTTGCCCGGAAACCATCGGCGGCCATCTTACTGGCGGGCCTGCGGGCGGCAAAGGCAAATTTTTGCGC CCCCGCGAGCGCCCCGTGCGCCTCCCTGCCTGCGACAGTCCGCCACAGTCGACTTTCCCCTGCCAGCCAGGCGCCACCCGCAGGCCACCGGGCGCCCGGG GTGTGGCAGCTCGTCGCAGTCGGGCCGCATCGGGGGGCCTTGCTAGCATCCGTCCCGCAGCGCCCCAGAGGCCTGCCAAGTGCATGCGGGCGCCATGAGG CGCCCGGTAGTCATCCAGGGATCGGACAGCTCGGCACCATGCGGCTCAAGTCGTTCCCGGAACCACTCGACAACAACAGGGACCGACGCCCATGGCCGTG
DNA Sequence for Gene
>SZ55_RS05645
ATGCCATCCCCTTCGTTCTGGCGCTCCGCCTTCCTCCCCTCGCCCGCCACGGCCTGGCCGCTGCTGCTCTTGCTCTGCGCCGCCGCCCAGGCCCAGGAAG ACGACAAGACCCTGGTGCTGGACAGCACCACCGTCACCGCCACCCGCAGCGCCAACAGCAGCTTCGACCTGCCGGCCTCGGTGTCCACGGTGGACCGCAA GGCCCTCGACGATACCCAGGCCGACAGCCTGTCCAGCGTGCTGCGCAGCCTGCCCAACGTGAACTTCGGCGGCGGCCCCCGCCCTGCGGCACAGATCCCC GCCATCCGTGGCCTGCAGGGGCCACGCATCATCCTCACGGTGGACGGTGCGCGGCGTAACAACGAGGGCGGCGTGAACAGCCCGCTGCTGCTCGACCCCG ACTTCATCCGCCAGGTGGACGTGGTGCGCGGCCCCATGTCGGCGGCCTATGGCAGCGGCGGCCTGGGCGGCGTGATGGCCTTCGAAACCCTGGCAGCGGA AGACTACGTCGACCCCGAGCGCGGCTACGGCGGCCAGGCCAAGGTGGGTTACCGCAGCGGCAACGAGGCCTTCTCCACCCACCTCACCGCCGCAGCGATG AACGACCAGGCCGACGTGCTGGCCAGTGCCACCTACCGCAACTACGGCGCCATTCACACCGGCAAGGGCGGCGCGGATTCGGAGTACCCCAACGACGGCG ACCTGGGCGCCAGCCTGCTCAAGGCCGGCCTCAACCTGGGCGAACTGAACCGGGTGGAGCTGAGCCGCCAGACCTTCGACGACGACTTCACCGGCCCCAC CAACCCCGGCGGCAACCTGGTGTTCCCCTTCGATCAGGACACCCGCCGCCGGCAGGAGCAGTACACCGGCAACTGGTCGTTCCACGACACCGACCGCAGC TGGCTGGACGGCAAGCTGAGCCTCTACCGCACCCGCTTCAGCCTCGCCGGCCACAGCCGCTCGACACCGCCCCAGGCCGACACCTCGGCCATGACCCGTA CCGACGGCGGCAGCCTGCAGAACACCAGCACCTTCGAGGTGGGCGAGCACGACCGGCAGCGCCTCACCTACGGCGTGGACTACTACAAGGACACCGCCGA GAACACCTCCAACGGCCAGGGCAATTCGGTGCTGCCCGACGGCGAGCTGCGCGCCCTTGGCGGCTTCATCCAGAGCGAACAGACCTTCGACCGCTGGACC CTGATCGCCGCGTTGCGCCACGACGACTACAAGCTGTCCTCCCCCGGCCAGGGCGACGCCCGCCACAGCCGCCTCTCGCCGAAGATCGCCCTGAAGTACC AGCCCATCGACCCCCTGGGGCTGTTCGTCAGCTACGGCGAAGCCTTCCGCGCGCCGACCATGACCGAGATGTACGGCAACCTGGACACGCGCCGGGCGCT GTTCAACTTCCGCCCCAACCCGGGCCTGGAACCGGAGACCAGCAAGACCTGGGAAGCCGGCTTCACCCTGGACTTCAGCGACCTGCTGGCCAGCGGCGAC CAGTTCCGCCTCAAGGCCACCGGCTTCGACGAGGATGTCTACGACCTGATCGACTCCCAGGTGGTCGGCACCTATGTGCGCCAGGCGCCCTTCGCCGGCG TCGGCCAGGTCTTCCAGCGGCGCAACGTGGCCCGGGCCGAACGCCGGAGTGGCGAGATCGAGGCGGCCTACGAGCTGGACCGCCTGAGCGTCGGCCTGGG GTACTCGCAGCTGCGCTCGCGCAACGCCCAGACCGGCGCCGACCTCTACGCCCCGCCGGACAAGCTGGCCCTGACCCTGGGCTACCGCCTCGACGAGCAG TGGTCGGTCAACTACCGCGGGCAGTTCGTCAAGGCCCAGGACTACGACGACACCCTGCTGCGCCGCCGCGACGGCTACGCCCTGCACGACATCGGCCTGA CCTGGGAGCGCGACCCGTACCGCGTCGACCTGGGAGTGACCAACCTGTTCGACCAGGCCTACGCCACCTACCAGCAGACCCAGGCCAACACCTTCAGCTA CGAGGAAGGCCGCAGCGTCAACCTCACCCTCAGCTCGCGTTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGACCGCCCATGCACGCCCATCGCCTTCCCCTTCTGCTCGGCACGGCCCTGCTCTCGGCATGCGCCGCCCAGGCCCCCAGCGGCCCGCAGCCGGTGGTG ATCGACTTCGCCCTACTGGCCAACGGACACCCCGCCCGCTGCGGTGCGCCCCTGGGCCCGCTGGGCGCCGATGCCCGCTCCTCGACCCTGCGCGATGCAC GGTTCTACGTGCAGGACGTGGCGCTGGTCCGCGCCGACGGCCAGGCCGTGCCCCTGGTGCTCGACCACGACGACTGGCAGGACGGCCAGGTCGCCCTGCT GGACTTCGAGGACGCCACCGGCACCTGCCAGGGCGGCACCCCGGCCACCCGCACCCAGGTGCGCGGCCAGGCACCGGCCGGTGACTACGTCGGCCTGCGC TTCAGCCTCGGCGTGCCCGAGGCCCTCAACCACACCAGCACCGAACTCCAGGGCCCGCCCCTGGACATCGCCGCCATGGGCTGGAGCTGGCAGGCCGGGC
Amino Acid Sequence
>membrane receptor protein
MPSPSFWRSAFLPSPATAWPLLLLLCAAAQAQEDDKTLVLDSTTVTATRSANSSFDLPASVSTVDRKALDDTQADSLSSVLRSLPNVNFGGGPRPAAQIP AIRGLQGPRIILTVDGARRNNEGGVNSPLLLDPDFIRQVDVVRGPMSAAYGSGGLGGVMAFETLAAEDYVDPERGYGGQAKVGYRSGNEAFSTHLTAAAM NDQADVLASATYRNYGAIHTGKGGADSEYPNDGDLGASLLKAGLNLGELNRVELSRQTFDDDFTGPTNPGGNLVFPFDQDTRRRQEQYTGNWSFHDTDRS WLDGKLSLYRTRFSLAGHSRSTPPQADTSAMTRTDGGSLQNTSTFEVGEHDRQRLTYGVDYYKDTAENTSNGQGNSVLPDGELRALGGFIQSEQTFDRWT LIAALRHDDYKLSSPGQGDARHSRLSPKIALKYQPIDPLGLFVSYGEAFRAPTMTEMYGNLDTRRALFNFRPNPGLEPETSKTWEAGFTLDFSDLLASGD QFRLKATGFDEDVYDLIDSQVVGTYVRQAPFAGVGQVFQRRNVARAERRSGEIEAAYELDRLSVGLGYSQLRSRNAQTGADLYAPPDKLALTLGYRLDEQ WSVNYRGQFVKAQDYDDTLLRRRDGYALHDIGLTWERDPYRVDLGVTNLFDQAYATYQQTQANTFSYEEGRSVNLTLSSRF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site